Leisingera sp. NJS204: ETW24_23075
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Entry
ETW24_23075 CDS
T05817
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lej
Leisingera sp. NJS204
Pathway
lej03420
Nucleotide excision repair
lej03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETW24_23075
03430 Mismatch repair
ETW24_23075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lej03400
]
ETW24_23075
Enzymes [BR:
lej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETW24_23075
DNA repair and recombination proteins [BR:
lej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETW24_23075
MMR (mismatch excision repair)
Other MMR factors
ETW24_23075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_11
AAA_30
UvrD_C
Skp1_POZ
SCF
Motif
Other DBs
NCBI-ProteinID:
QAX32272
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Position
unnamed5:23446..25290
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AA seq
614 aa
AA seq
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MTAELKPTEADKKIAECIAKDVSFSVIAGAGSGKTTSLVEALKGIQRSRGNELRKNGQRV
VCITYTNRAVGVISSRLGFDDLFYVSTLHGFLWAEIARFQDAIRETLRDAIVPQHMEKAR
EKDNGGTSQAAQKARKDLERLTAQLAALNAHKPPICYEETVISDYSKCVLNHDDVIDVAA
YLITNKPLLRKGLGFKYPYIFVDEAQDTFPQVVEALNAVCADEGLPIVGYFGDPMQQIYD
KRAGGFAGPKGSEKIPKEENFRSSTSVIDLLNNFRTDLKQVPGGKNSDVKGSVLITIAQA
PDPAGPRKTYTSEQLDEVTAKFEEAVEQWGWTDITPVKNLFLARQMIARRLGFVTLHKLF
TGDYSSSRSQSDYEDGTHYLLKPFVDGIFSLVDASRNNYPKKLIETLRRISPAFDDTGAN
KSKTLKQMLEEASKHAAALAEKWEGNTVKEILEYCSANALYPISDRLAGQLARAPRQAYD
SGNEDHQREKGDWLADEFFKLKADELEKYIEFLDENSPFSTQHGSKGEEYENVLVMIDDI
EAAWNTYSFSKVLTPGVAGNPTDRQQELTQKLAYVCFSRAEVNLRILMFSKAAEAAKKEL
VERGLFQDSQVSIL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagaactcaagccaactgaggccgataagaaaattgctgagtgcatcgccaag
gacgtttcattttcggttatcgcaggcgctggttcaggcaaaaccacatcgctcgttgaa
gctctgaaaggaatccagaggtcccgtggaaacgagcttcggaaaaacggtcagcgcgtg
gtgtgtatcacatacacaaaccgtgccgttggagtgatttcgtcgcgtctaggtttcgat
gacctcttttacgtttccactctgcacgggttcctttgggcggaaatcgcgcgcttccag
gatgctattcgggagacccttcgtgatgcgatcgtcccgcaacatatggaaaaggcccgc
gagaaagacaacggggggacgtctcaggccgctcaaaaagcgaggaaagaccttgagcgc
ctgactgcccaacttgctgcgctaaacgcgcataaaccgccgatatgctacgaagaaacc
gttatcagcgactattccaaatgtgtcctgaaccatgatgatgttattgacgtcgcggcc
tatctaatcacgaacaaaccactcttgcgcaaaggcctcgggttcaaatacccctacatc
tttgtcgatgaagctcaagacaccttcccgcaggtcgtcgaggcgctcaatgctgtgtgc
gcggacgaaggtttaccaatcgtcggatatttcggcgatccgatgcagcagatttacgat
aagcgtgccggaggttttgccggtccaaaaggctccgaaaagattccgaaggaagagaat
tttcgaagctcaacctcggtgatcgaccttctcaacaacttcagaaccgatctgaagcag
gttccgggtgggaagaactccgacgttaagggcagcgtcttgattacgatcgcgcaggct
cccgaccctgccggtccacggaaaacctatacctctgaacaactcgatgaggtaacggcg
aagttcgaggaagccgttgaacaatggggatggaccgatattactcctgtaaagaacctt
tttctggcacgccagatgatcgcccggaggctcggattcgttacactgcacaagctcttt
acaggtgactattcgtcgtccagatcccaatccgactatgaagacggcacgcactatctt
ctcaagccctttgtggacggcattttttctttggtcgatgcatcccgcaacaactatcct
aagaagctgattgaaacactccgaagaataagccctgcttttgacgacactggagcgaac
aagagcaaaaccctcaaacagatgctcgaggaagcctcaaaacacgccgctgctttggca
gaaaaatgggaaggcaatacggtcaaagaaattctggaatactgtagcgcgaacgcgctt
tatccaatttcggaccgccttgcaggtcagttggctcgcgctccccgccaagcttatgac
tccggcaatgaggatcaccaaagggaaaaaggagattggctggctgatgaattcttcaag
ctgaaggctgacgaactcgaaaagtacatcgaatttctggatgagaattctcctttcagt
acgcagcacggctcgaaaggcgaagagtatgaaaacgtgctggtcatgatcgacgatatc
gaggcagcctggaatacctacagcttttcgaaagttctgacccctggtgtcgcgggcaat
ccgaccgaccggcagcaagaacttactcaaaagctggcttatgtctgtttttcacgggcg
gaagtgaaccttaggattttgatgttttcgaaagccgcggaagcggccaaaaaagaactg
gttgagcgcggtttgttccaggacagccaggtttcaattttatag
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