Leptolinea sp. HRD-7: hrd7_02000
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Entry
hrd7_02000 CDS
T08293
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lek
Leptolinea sp. HRD-7
Pathway
lek03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
hrd7_02000 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lek03021
]
hrd7_02000 (rpoA)
03400 DNA repair and recombination proteins [BR:
lek03400
]
hrd7_02000 (rpoA)
Enzymes [BR:
lek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
hrd7_02000 (rpoA)
Transcription machinery [BR:
lek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
hrd7_02000 (rpoA)
DNA repair and recombination proteins [BR:
lek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
hrd7_02000 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BCY16351
LinkDB
All DBs
Position
complement(227507..228472)
Genome browser
AA seq
321 aa
AA seq
DB search
MTTLFNMVTPKVEREAEARNYGKFIISPLEHGYGVTLGNALRRVMLSSLSGAAITSIRIA
DVLHEFSDIPGVREDVIQVTLQIKQIRLIMHDVETAHLRLDIRGEGQVTAADIIAPPEVE
IVNPDLYLFTVDDPKTKLEIDMTVERGRGYSPANERTTHLPIGELPVDAIFSPVKRVNWT
VSNARVMQSTNYDRLNLEIWTDGTIKPEEALGNASKILIDHLRLVSGVSEEVSVLGTEKE
VSGSRLTSEAAETPIENLDLSVRVFNSLKRTGITTVGDVLDLLEKGEEAVMSIRNFGEKS
LDELREKMQEKNYLPQDKDVE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
gtgactactctctttaacatggttaccccaaaggtggagcgcgaggctgaagcgcgaaac
tatggaaaatttatcatcagcccgttggaacatggatatggcgttaccctgggcaatgcc
ctgcgccgtgttatgctttcatcactgtcgggtgctgccatcacgtccatccgcatcgcg
gatgtgctgcatgagttcagcgatatcccgggtgtgcgggaagatgttattcaggtaact
ctgcagatcaagcagatccgcctgatcatgcatgatgtggaaaccgctcatttacggtta
gatatccgtggtgaaggtcaggttacggcggccgatatcatcgcgccaccggaagttgaa
atagtcaaccccgacctgtacctgttcactgtggatgatccaaaaaccaaactggaaatt
gacatgaccgttgaacgcggccgtggttattctccggcaaatgaacgcaccacccatctg
cctatcggcgaactgcccgtggatgccattttctccccggtaaaacgcgtcaactggact
gtgtccaacgcccgcgttatgcagagtacaaactacgacagactcaaccttgagatctgg
acagatggaacgatcaaaccggaagaagctctcggaaatgccagcaagatccttatcgat
catctgcggttggtttccggagtctccgaagaggtgagcgttcttggaacagaaaaagaa
gtcagcggcagccggcttacaagtgaagcagccgaaacccccatcgaaaatcttgacctt
tcggtgcgtgtattcaactcactgaaacgtaccggaatcaccacggttggcgatgttttg
gatctgctggaaaaaggcgaagaagcggtaatgtctatccgtaactttggcgaaaagagc
ctggatgagctgcgcgagaagatgcaggaaaagaactacctgcctcaagataaagatgtg
gagtga
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