Leptolinea sp. HRD-7: hrd7_11270
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Entry
hrd7_11270 CDS
T08293
Name
(GenBank) tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
lek
Leptolinea sp. HRD-7
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lek03016
]
hrd7_11270
Enzymes [BR:
lek01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
hrd7_11270
Transfer RNA biogenesis [BR:
lek03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
hrd7_11270
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_7
Acetyltransf_1
Motif
Other DBs
NCBI-ProteinID:
BCY17278
LinkDB
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Position
complement(1228950..1230554)
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AA seq
534 aa
AA seq
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MVDIEKWTESRRFTPEKLAAARIILEDVKNGADVFTAIRKNPLPGVGYLAKHTLVEAYRL
LVTSGEWTEDTELFKRIRLKPVRTLSGVTTVTVLTGPHECPGKCIFCPDDARLPKSYLYG
EPGAMRGMQNDFDPYRQVASRLEALDAVGHPIDKIELLILGGTFTAYSTDYQEWFIRRCF
DAMNGFDAATLDEAQKANENADHRNVGLVIETRPDEVTPDVLAKLRLLGVTKVQIGAQSL
DDHLLTINKRGHTAGQTLDAVCKLRAAGFKVVLHWMPNLLGATLLSDREDFARLWSQGYC
PDEIKIYPTQLVENSELYSVWQQGRYQPYTTEELVQLMADLKVTIPRYCRVNRVIRDIPS
NLIAAGNKRSSLRMDVQQELQRRGQQCQCVRCREVRGEQVNPEELVSHDLVYPTPASTEH
FLSFDTPEDKLAGYLRLSLPNLTMNGDVRAAMPDLDGAAIIREVHVFGQAQPVGGSEAGA
AQHTGLGTALLLEAEKIALENGYKKLAVISAVGTRVYYQKRGFERGSHYYVKNL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggttgatatagaaaaatggacggaatcccgccgcttcactcccgagaagctcgcggca
gcccgtatcatactcgaagatgtaaaaaatggcgcggatgtgttcacagccattcgtaaa
aatcccctgccaggcgtgggttatctggccaagcatacgctggttgaagcctaccgcctg
ctggtgacttccggtgagtggacggaagatacggaattgtttaaacggatccgccttaag
cctgtgcgcacgctttcgggtgtgaccaccgtcaccgtgctgaccgggccgcatgaatgc
ccgggcaaatgcattttctgcccggatgacgcccgcctgcccaagagctacctgtatggt
gagccaggagccatgcgcggcatgcaaaatgactttgacccgtaccggcaggttgcatcc
cgccttgaggctttggacgcggtaggacacccgatcgacaaaattgaactgcttattctg
ggcggtacatttaccgcctattccactgattatcaggaatggttcatccgccgctgcttt
gatgccatgaacggcttcgatgccgccacattggatgaagcccagaaagccaatgagaac
gcggaccaccgtaatgtcgggctggtgatcgaaacccggccggatgaagtcacaccggat
gtgctggcaaaattgcggcttttaggtgttaccaaggtgcagatcggagcgcaaagcctg
gatgatcaccttttgaccatcaacaaacgcgggcataccgccggtcaaaccctggatgcc
gtttgtaaattgcgcgcggcaggctttaaggtggtgcttcactggatgcccaatctgtta
ggggcgacccttttaagtgatcgcgaggactttgcccgcctgtggtcacagggatattgc
ccggatgagatcaagatataccccacccagttggtggaaaattccgagttgtattctgtg
tggcagcaaggccggtaccagccctataccacagaagaactggtgcaattgatggccgat
ctcaaagtgaccatcccccgctattgccgggttaaccgtgtgatccgcgatattccatcg
aacctgatcgcggctggcaacaagcgcagcagcctgcgcatggacgtgcagcaagaattg
cagcgccgtgggcagcaatgccagtgtgttcgctgccgcgaagtacgcggcgaacaggtc
aacccggaggaattggtctcccacgatctggtatacccgactccggcgtcaacagaacat
tttctgtcgtttgacaccccggaagacaaactggccggttatctgcgcctgtctttgccg
aacctcaccatgaacggtgatgtccgcgcggccatgccagatctggatggggcggcgatc
atccgagaagtacacgtattcgggcaggctcagcctgttggtggcagtgaagccggcgcc
gctcagcataccggtctgggaaccgccttattgctggaagcggaaaagatcgctcttgag
aacggatataaaaagctggctgtcatctctgccgtagggacccgggtgtactaccagaaa
cgcgggtttgagcgcggtagtcactattatgtaaaaaatctctaa
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