Leptolinea sp. HRD-7: hrd7_11870
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Entry
hrd7_11870 CDS
T08293
Name
(GenBank) hypothetical protein
Organism
lek
Leptolinea sp. HRD-7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
Sortase
Big_3_5
TRAP_beta
Motif
Other DBs
NCBI-ProteinID:
BCY17338
LinkDB
All DBs
Position
1298181..1303694
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AA seq
1837 aa
AA seq
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MRPSFRTNLALIILVIIVAAFTWNPAHADDPYTQPAINKTFSDIVIIPGVTTQLTVKVFN
ENQFGLVDIAYTDVMPPNIKIVTPAVASNSCGGTVTAVPGTNTFSISGGSVPPKTTSVLA
ECSLVLNVTSTVAGTHINTIHAGDLSARDADRALPVLHNEYPASATLQVLVVQPPSLSKI
FNPTTIFVGEVSRLTITIRNNDLLNDLHETTFTDTLPAGVVLAPTVNPVLTGCGTGTVTA
VSGTNTITLNNATVTKNSTCSVAVNVTSSTQSDTPYVNTIPAGPGSGAISTREGVTNATA
ASASLYVQNVGIAKSFSPTSIVAGATSTLTITLRNPTGTAYTGASISDTLPAGLIIAPAG
GSTTCGGGTIDYPDGADNTLGANERTIRLTGGTIPASPTPPTPYGTCTITVAVTTLPDAP
AATLTNTIPPNSLTTDQGITNPSAVTANLAITRWLTGTKAFNPASIPTGGTSTVTITLRN
NRTDVNGDLTDVTFTDTLPANVTVSGVPATPQCGGTVSYTATTVTLVGGSIPRNSSCTIV
FQVTTSANGTYSNTIPAGDISTGQGASNVLITSNNLSSITGGGPVRVSKNFQTSPIAPGA
NVRLRIRLTSPTDIGISGINFTDTLPAGMRITNSTPASNACGGTLTSITGTNQITLTNGA
IAAPDTACNIDVYVTADDSMSYTNTIPVGAITTAELRSNTSAASATLVVSGFTMSKKFYP
DVVNPNGFSTLTITLVNSTTTPITNVTLTDSLSTMGGTPPTSGVYIADNPNPVVTCAGGV
IDYPDGADNALGPNERTIRMTGGTIPPRVGTTDGACTISIDVQGRGAGATRTNTIPVANA
SGTISNTTVGPRAPATATLTIGSLSIDINKKFDPILVYGGAASTLSVTISNPNSSPLTGI
TFTDFLPAGMIIATPADLNPGPLCGPNAKLTGVSGSDSFTFSDGELPPSRSCVMSLRVTM
NVNGNLTNTIPAGAVTTFNGVTNPNPIQATLSNLAGASISKGFSPNPVLAGNDNYSTLTI
TITNTSGLDLTGMGLVDTLPGTPPTGLVIAGAPAPAPSTTCSLGTLTAVPGTQHIELTGA
TLLRNSSCFITVPVTSETPGNYANLISAGTLISDQNITNPDPATAALLVISTTASPTTGT
VGETITAGDSINLSGANNPTGSVTFTLYSDAQCTIPVPGMSGSGVIANGAASWSNTWTPT
APGIYNWVASYPGDANNNAFTTKCGDVNEQIEITAIHPSIEVTKTPKAQTVVSGEDVNFT
LTVNNTGDVPLSDVTLTDLTCDTLSGPVGDENSNNILETTETWVYACTVNNVTGAFTNTV
SVTGTPPVGEIVTDDDEADVTVSILTDLTKNLVADSLWTTINPKATVGEIVTYAVTLSIP
AGGFMSDMTLTDELDHGLAFVDCESIIPETDAVTTDITGDFSSDFSHVCNNPVVTGIGSD
PSDAGRQIVFNFGTVANSDNVARIITIRYRVVLLDIASVVQGVNLNNDVRWDWTGGSLTT
NNPTLEVVEPHLALNKSANVAMAMPGSSITFRLEVSYVGDGSPAYDVLLMDKVPNGITYE
PGSFRFLSGQAPVLDDSSAPTLKATWATFQNTGVPTILEFKGTLANLPSGTTVTNTAYLS
WSSLPGDVTDPQSPYNDYSVERNYDPGSPVNVYGVSSSATITVMRKILPSSGFAPGRVTV
LPSQPAQAAYNSLGNLWLEIPKLNVQIPILGIPAKEATWDLTWLSNQAGYLEGTAFPGAV
GNSVLTAHVYKADGSSGPFVNLGNLRWGDQVILHNQGQRYIYEVRSNQMILPGDTSILRH
EKYSWLTLFTCKGYSETRGDYLYRVAVRAVLVRVEAE
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccatcttttcgaacgaaccttgctctaattattttggtcatcatcgtggcagcc
tttacatggaatccagcgcatgcggatgatccatacacccagccggcgatcaacaagaca
ttttctgatattgtcattatcccaggggtgaccacccagctgacggtgaaagtatttaat
gaaaaccaattcggactggtggatatcgcctatacggatgttatgccgccgaatattaag
atcgtgaccccggcagtggcgagcaactcctgcgggggtacggtcaccgctgttcccggt
acgaatacattttccatcagcgggggttctgtccctcctaaaacaacatcagtcctggcg
gaatgttctctcgtcttgaacgtgacctcgaccgtggcaggtacccatatcaatacaatc
cacgcgggtgatctctcagcccgggacgcggatcgggcactgcccgttttgcataatgag
taccctgccagcgctaccttacaggtgctcgttgttcaaccgccttcgttgagcaaaatc
ttcaacccgaccacgatcttcgtgggcgaagtaagccgcctgaccatcaccatccgcaat
aatgatcttctcaatgatctgcacgaaaccaccttcaccgataccctgcctgcaggagtt
gtgctggcgccaaccgtgaacccggtgctgacaggttgcgggaccggcacggtgaccgcc
gtttcggggacgaacaccattacgctgaacaacgctacagttaccaagaacagcacttgt
tcagttgcggtcaatgttacttcgagcacccaaagcgacactccctatgtgaataccatt
cctgcagggccaggaagcggggcgatcagcacacgagagggcgtgaccaacgcgacggcg
gcaagcgcctcattatatgttcaaaatgtgggtatcgcaaagtcattctcaccgacttct
attgttgccggcgcaaccagcacgcttaccatcaccttgcgcaatccaacgggcacagcc
tacactggggcgtctatttcagacaccctgccggcagggctgatcatcgccccggcagga
gggtctaccacctgcgggggggggactatcgactaccccgatggggctgacaacacgctg
ggtgccaatgaaagaaccattcgcctcactggcggcaccatccccgccagccctactccg
ccaacaccttacggtacctgtaccatcacggtggcggtcaccaccttgcccgatgccccg
gcagcgaccttgacgaacaccattccaccaaattctctgaccactgaccaggggatcacc
aacccttctgctgtaacagccaacctagcgattacccgctggctgacaggtacaaaggct
ttcaatcctgcatccataccaacaggcggtacgtccactgtcactatcaccctgaggaac
aatcgcacggatgtaaacggtgacctgacagatgttacgtttacagacaccctgcctgcc
aacgtgactgtttcaggcgtgccggctaccccccagtgcggaggtacagtttcatatact
gctacaacggtaacattggttggagggtcgatcccaaggaattccagttgcaccatcgtc
tttcaggtgaccacttctgccaatggcacgtacagcaacaccattccagcaggggatatc
agtacagggcagggcgcgagcaacgttctcatcacttccaataacctaagttccataacc
ggcggcggaccggtgagggtaagcaagaattttcaaaccagccccattgcaccgggagcc
aatgtgagattaaggatcagactcacctctcccacggatattggtatttcagggattaat
ttcactgatacccttccagctggcatgcgcatcacgaacagcacacctgccagcaacgcc
tgtggtgggactctcacatcaatcaccggcacaaatcagatcaccctgacaaatggagcg
attgcggctcctgatactgcttgtaatattgatgtttatgtgaccgcagatgattccatg
tcatatacgaacaccatcccagtaggagccatcacgaccgcggaattaaggtcgaacacc
agcgcagcttctgcgacactggtcgtttctggcttcaccatgagcaaaaagttctatcct
gatgtggtcaaccctaatggtttttccaccctgacgatcaccttggtgaacagcaccaca
acaccgatcaccaatgtaacactgactgattcactctcgaccatgggaggaacgccacca
accagcggagtctatatagccgacaatcccaaccctgttgtcacctgcgccggcggggtg
atcgactaccccgatggcgcagataacgctctcggccccaatgagcgtaccatccgcatg
acaggtgggacaatccctccaagggtcgggacaactgatggcgcctgcacgatctccata
gatgtgcagggtagaggcgcgggggcaacacgtacgaataccattccggtggcaaatgcg
agcgggacgatctctaacaccacggttggtccacgggctccagcgactgccaccctgacc
atcggtagcctttccatcgatatcaacaagaaatttgatccgatcctcgtctatggtggt
gcggcgtctacattaagcgtcacgatctcaaacccgaatagttctccccttaccggaatc
actttcactgatttcctgccagccggcatgatcattgccactccagcggacttgaatccg
ggcccgttgtgcggaccaaacgcaaaactgaccggggtttcaggttcagactcattcacc
ttcagcgatggcgaactacctccaagcaggagttgcgtgatgagcttgcgggtcaccatg
aacgttaatggcaacctgaccaacaccatcccagccggcgcggtaactacattcaacgga
gtaaccaatcccaaccccatccaggcaaccttgtccaacttggcgggggcaagcatcagc
aaagggttctctccaaacccggtgctggcaggcaatgataactattcaaccctgaccatt
acgatcaccaatacctcgggactggacttgaccggcatgggactggtggacaccctccct
ggaacacctccgaccggattggtgatcgcgggtgcacctgcgccagcgccatccactacc
tgcagccttgggacgctcactgcggtacccgggactcaacacatcgagcttactggcgca
acgctattgagaaactcatcttgtttcatcaccgtccccgtcaccagtgaaacgcccgga
aattatgcaaacctgatctcagcaggcacgctcatctctgaccaaaatattaccaatcct
gaccctgccactgcagctcttttagtgatctcaacgactgccagcccaaccacaggcaca
gtgggggagacgatcacagcgggggatagcatcaatctgagcggagccaacaacccgact
ggctcggtaactttcacgctgtacagcgatgcgcagtgcaccatcccggttccggggatg
agcggcagcggggtaatcgctaacggagcagcctcttggtctaatacctggactccgacg
gcgcctggaatttataactgggttgccagttacccgggtgacgcaaacaataatgctttc
acgaccaaatgcggggatgtgaacgaacagatagagataaccgcgatccacccatccatt
gaggtaacaaaaacaccaaaagcacaaactgtggtcagcggagaagatgtgaacttcacc
ctgaccgtaaataacaccggcgatgtgccactatctgatgtaacgctcaccgacctgacc
tgcgatacacttagcggaccagtgggtgatgagaacagcaacaacattctcgagaccact
gaaacctgggtttatgcttgcacggtgaataatgtaacgggagcgttcaccaatacagta
agtgtgaccggaacacccccggtgggagagatagtgactgatgatgacgaggcggatgtt
acagtctccatcctcaccgacttgacgaaaaacctggtggcagacagcctttggaccaca
attaatccgaaggcgacagtcggcgagatcgtaacatacgctgtcactttaagcatacct
gctggtgggttcatgtctgacatgacgctaaccgatgaactggatcatgggctggctttt
gtggactgcgaaagcatcatacccgaaactgatgcggtgacgacagatatcaccggagac
ttttcgagcgatttcagccatgtttgtaataatccggttgtgactggtattggttctgat
ccgagcgacgccgggcggcagattgtcttcaattttgggacggtggcgaacagcgataat
gtagcgcggataatcacaatccgctaccgtgtggtgttgttggatatcgccagcgtggtc
caaggagtcaaccttaataacgacgtgcgctgggattggaccggcggcagtctaaccaca
aacaacccgaccctggaggttgtcgagccgcatttggcgcttaataaaagcgcaaatgtg
gcgatggcgatgcctggctcaagcatcaccttcaggctggaagtatcctacgtcggcgat
ggatctccggcatacgatgtgctgctgatggacaaagtgccgaatgggattacttacgaa
cctggctcatttagattcttgagcggacaggcacctgttcttgatgatagtagcgcacca
acgttgaaagccacttgggctaccttccagaacaccggggtacccactattttggagttc
aagggaacgctcgccaaccttccaagcgggacaacagtgaccaacacggcttatctgagc
tggtccagcctgcctggagatgtaaccgacccgcaatctccgtacaatgattattctgtg
gaacgcaattacgacccgggcagcccggtgaatgtgtacggtgtcagcagcagtgcaacc
atcaccgtcatgcgtaagatcttgccttcttccggtttcgcgccaggacgggtaacggtg
ctcccttcgcaacccgcacaggcggcctacaacagcctggggaatttatggctggaaata
cccaagcttaatgttcagattcccatcttaggtattccagcaaaggaagccacctgggac
ttgacctggttatcgaatcaggcgggttacctggaaggcaccgctttcccgggtgcagtt
ggtaattcagtgctgaccgctcacgtatataaagcggatggcagttcgggtccgtttgtt
aacctcggcaacctgcgctggggtgaccaggtcatcctgcacaatcagggtcagcggtat
atttatgaggtgcgctcgaaccaaatgatactccctggagatacttccatcctgaggcat
gaaaaatactcctggctgaccttgttcacctgcaagggttacagtgagacgcggggagac
tacctgtatcgtgttgctgttcgggcagtgctggtgagggtggaagccgaataa
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integrated database retrieval system
