Leptolinea sp. HRD-7: hrd7_12020
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Entry
hrd7_12020 CDS
T08293
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lek
Leptolinea sp. HRD-7
Pathway
lek03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
hrd7_12020 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lek03400
]
hrd7_12020 (ung)
Enzymes [BR:
lek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
hrd7_12020 (ung)
DNA repair and recombination proteins [BR:
lek03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
hrd7_12020 (ung)
Prokaryotic type
hrd7_12020 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
BCY17353
LinkDB
All DBs
Position
complement(1318352..1319023)
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AA seq
223 aa
AA seq
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MPIPESWLPALVAETNKPYYEQLYRFVADERRKFKVFPPGPDVFNALRYTPFDRVRVVII
GQDPYHDDNQAHGLAFSVQPGVPVPPSLQNIYKELHDDVQFRVPNHGCLIPWAEQGVLLL
NAVLTVRAHQANSHQGKGWENFTDAVLKAVNSRQERVVFLLWGSYAQRKAEWIDTTRHTV
LKAPHPSPLSASRGFFGCAHFSKTNAALQSAGFAPINWQLPNL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcctattccggaaagctggcttcccgctctggtcgcagaaaccaataaaccttattat
gagcagttgtaccggtttgtggcagatgaacgccgcaaattcaaagtattcccaccggga
ccggatgtgttcaacgcgctgcgctacaccccgtttgaccgggtgcgcgtggtgatcatc
gggcaggacccgtaccacgacgacaatcaggcgcatggactggcgttttccgtccagccg
ggcgtgccggtgccgccatctttgcaaaatatctacaaagaactacatgacgacgttcaa
ttccgcgtacccaaccacggctgcctgatcccctgggcggaacagggtgtgctgctgctg
aatgcagtccttacggtgcgcgcccaccaggcgaattcgcaccagggaaaaggctgggag
aactttaccgatgctgtgctaaaagccgtcaacagccggcaggaacgggtggtgtttcta
ttatggggtagttacgcgcagcgtaaagcggaatggatcgataccacccgccatactgta
cttaaggcgcctcatccatcgccactctcggcttcgcgtggatttttcggctgtgcgcat
ttctccaagaccaatgctgccctgcaatcagctggatttgcgccgataaactggcaattg
ccgaacctatga
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