Leptolinea sp. HRD-7: hrd7_15230
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Entry
hrd7_15230 CDS
T08293
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lek
Leptolinea sp. HRD-7
Pathway
lek03420
Nucleotide excision repair
lek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
hrd7_15230
03430 Mismatch repair
hrd7_15230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lek03400
]
hrd7_15230
Enzymes [BR:
lek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
hrd7_15230
DNA repair and recombination proteins [BR:
lek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
hrd7_15230
MMR (mismatch excision repair)
Other MMR factors
hrd7_15230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BCY17674
LinkDB
All DBs
Position
complement(1626058..1628295)
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AA seq
745 aa
AA seq
DB search
MITNTDFLSGLNPQQKQAVTAQPGHILVLAGPGSGKTRVLTHRIAYLITQFHLPPDNILA
VTFTNKAARVMESRVEDLLGEKPRGLWLGTFHAICARILRREADHLPFGSNFVIYDEDDQ
QSLVKTALRELNIDEKMYKAASIRGAISAAKNNMQKPEDLTSRTYREEVNLRVYQRYQEL
LRANNAVDFDDLLNEVVNLFEAKPEVRERYSRRFGEVLVDEFQDTNTAQYQILRHLALSG
NSMFVVGDEDQSIYRWRGADYRNVQSFERDYPDCQKILLEQNYRSTQTVLDAARAVIDHN
INRTPKHLFSDNGKGEKIILNDLMDDKMEADFVADTIQKNIKAKLWKGSDVAVMYRTNAQ
SRLLEEAFLKARLPYRLVGAQRFYGRREVKDIIAYLRLIYNPSDEVSLTRVINVPTRGIG
DKSVSTLLQYAHNLKLSAGDVLSELGKLGQQSQHFSAFSGSIGIKLADFGSMLNSWRESI
TKGFPLTRLFQQILDDIRYEEYIDDASEEGHQRWENVLELGKIATEFDDRGLDEFLERLA
LVSDQDTLAEGTEAPTLLTLHAAKGLEFAVVFITGLDDGVLPHSRSLDDPEEMAEERRLL
YVGITRAKERLYITRADRRSSYGGYENCTPSRFLRDIPATLVMNSGIIMPTRTSRPSMER
RMENYSNWSTPSPTYGSFKPAPRQSKPPVEQRFPANCRVRHEVWGEGLVVKSVLEDGDET
VDVFFDTVGFKRLIASLAKLEIVKK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgataaccaatactgattttctttccggattaaatccacagcaaaaacaggcggtaacc
gcccaacccggtcacatccttgtgctggccggtcccggttcggggaagactcgtgttctt
acccaccgtatcgcttacctgatcacccagttccatttgccgcccgataacatcctggct
gtgactttcaccaataaagccgcccgcgtgatggaaagccgggtagaagacctgctgggt
gaaaaaccccgcggcctgtggctcggcacattccacgctatatgcgctcgaatattgcgg
cgtgaagctgatcacctgccgttcggctccaactttgtgatctatgatgaagatgatcag
caaagcctggtcaaaaccgccctgcgtgagttgaatatcgatgagaagatgtacaaagcg
gccagtatccggggcgcgatttcagccgccaagaataacatgcagaaacccgaagacctt
acatcacgcacctatcgcgaggaggtcaacctgcgggtgtatcagcgttatcaggaattg
ctgcgcgcgaacaacgcggtggattttgacgatttactgaacgaggtggtcaacctgttc
gaagccaaacccgaagtccgcgagcggtacagccgtcggttcggcgaagtgttggtggac
gaatttcaggataccaacaccgcccagtaccagatcctgcgtcatctggcattaagcggc
aacagtatgttcgtggtaggtgacgaagatcagtccatctaccggtggcgcggcgcggat
taccgcaacgtccaatcctttgaacgcgactaccccgattgtcagaagatcctgctggag
cagaattaccgctccacccagaccgtgctggacgccgcaagagcggtgatcgaccacaat
atcaaccgcacccccaagcatttattttccgataacggcaagggggaaaagatcatcctg
aacgacctgatggatgacaagatggaagccgattttgtggccgataccatccagaagaat
atcaaagcgaaattatggaagggcagcgatgtggcggtgatgtaccgcaccaacgcccag
tcccgcctgctggaagaggcttttctgaaagcacgtcttccctatcgccttgtgggcgcg
cagcggttctacggccggcgcgaggtcaaagatatcattgcctatctgcggctgatctac
aaccccagcgatgaggtcagtctgacgagggttatcaatgttcccactcgcggcatcggt
gacaaatctgtgtccacattgctgcagtatgcgcacaacctgaaactttctgcaggagat
gtcctgtccgaactgggcaaactgggacagcagtcacagcatttttcagccttttcaggc
agtatcggtatcaaactggcagattttggctccatgctgaacagttggcgcgaatccatc
accaaagggttcccattaacccgcctgttccagcagattctggatgacatccgctacgaa
gaatatatcgacgatgcatcagaagagggccatcaacgctgggaaaacgttctggaactt
ggtaagatcgcgactgaatttgacgaccgcggcctggatgaatttctcgaacggttggcg
ttggtctccgatcaggataccctggccgaaggcaccgaagcccctaccctgttgaccctt
catgccgccaaagggttggaattcgcggtggtgttcattaccggcctggatgacggtgtt
ctgccgcatagccgttcactggatgacccggaagagatggcggaagagcgccgcctgctg
tatgtgggaattacccgggccaaagaacgcctgtatattacccgggcggaccgtcgcagt
tcgtacggtggttatgagaactgtacaccctcacgtttcctgagggatataccggcaact
ctggtcatgaattccgggatcattatgcctacacgcacatctcggccatcgatggaacgc
cggatggaaaattactccaactggtccacgccatctcctacttatggctcattcaaaccc
gcgccacggcagtccaaaccaccggtggaacagcgcttcccggccaattgccgagtcaga
catgaggtgtggggcgaaggattggtggtcaaaagcgtgttggaagacggcgacgagacg
gtggacgtgtttttcgacacagttggttttaagcggttgatcgcttcgctggcgaaattg
gaaatcgtgaagaaatga
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