Leptolinea sp. HRD-7: hrd7_16390
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Entry
hrd7_16390 CDS
T08293
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
lek
Leptolinea sp. HRD-7
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lek03400
]
hrd7_16390 (sbcD)
DNA repair and recombination proteins [BR:
lek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
hrd7_16390 (sbcD)
Archaeal homologous recombinant proteins
hrd7_16390 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BCY17790
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Position
1752152..1753399
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AA seq
415 aa
AA seq
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MRILHFADAHIDIASQRRRDPETGLPFRVLDFLKALDSIVDTAINEKVDLVLFAGDAYKD
RTPVPTYQREWGRRIMRLSQNRIPTLLLVGNHDLPPAKERANALQEFDTLEVPYIKVLSR
PCFLGPDDLNGLPLQVIALPWISRSGRMALQTENGESSEEAYEKLEELSTGLVTQWIENA
DPSIPLILTAHGMVQGAMLGSERTISLGSDLVFPGSLVKHPGLAYTALGHVHKYQDLNAG
NQPPVIYAGSIERVDFGEINDEKGFVIATVEPGKPTRIERRVLKGRKFIDRQVQLDSAED
ILTKLPEVIPSAAELDGAIFRLILDYPRSIESMINEGDIREKAAAAFEFHLIRHPRAEAR
SRLADSQGISSLQKEEQLDAYWKSLRIDEDERDALNQLAKSIFSTSIGMGDDQIF
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatattacattttgccgacgcccacattgacattgccagccaacgcagaagagac
cctgaaaccggattgccctttagagtgctagattttctaaaagcgttggactcaattgtg
gatacagcgatcaacgagaaagtggacctcgttctctttgccggggatgcttataaagac
cgcacacctgttccaacctatcagcgggaatggggaaggcgcatcatgcgcttatcgcaa
aaccgaattcccacgttactgctggtaggcaatcatgaccttccaccagccaaagaacga
gcgaatgcccttcaagaatttgatacccttgaagtcccatatatcaaagtcctgtcaaga
ccatgttttttaggaccagacgatttgaacggactgccgttgcaggttatcgcgctccca
tggatatcacgttctggacgcatggccctgcagaccgaaaacggtgaatcatcggaagaa
gcatatgaaaagctggaggaattgagcacaggtctggttactcaatggattgaaaacgct
gacccatccattccgctcatattgacagctcatggtatggtgcagggtgccatgctggga
tccgaacgtaccatcagcctggggagcgacctggttttccccgggtcgttggttaaacac
ccggggctggcgtataccgctctcggccatgtccataaataccaggacctgaacgcggga
aatcagcctcctgttatttatgccggctctattgagcgagttgattttggcgaaatcaat
gatgagaaaggttttgttatcgccactgtggaaccggggaaaccgacccgcatagaacgg
cgtgtcttgaaggggcgaaagtttatcgaccgccaggttcaactggattcggccgaagat
attttgaccaaactgccggaagtgattccgtccgcggctgaactggacggagcgattttc
cgtctgatcctggattatccgcgctcaatagagtcaatgatcaatgaaggggatatccgt
gaaaaggcggcggcagcgttcgaatttcatctgatacggcatccgcgcgccgaagcccga
tcccgcctggctgacagtcagggtatcagtagtttgcaaaaggaagaacaattagatgcc
tactggaaatctctccggatagatgaagatgaacgtgatgcattgaatcaattggcgaag
agcattttttcgacatccattggaatgggtgatgaccagattttttaa
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