Leptolinea sp. HRD-7: hrd7_17400
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Entry
hrd7_17400 CDS
T08293
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lek
Leptolinea sp. HRD-7
Pathway
lek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
hrd7_17400 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lek03019
]
hrd7_17400 (recQ)
03400 DNA repair and recombination proteins [BR:
lek03400
]
hrd7_17400 (recQ)
Enzymes [BR:
lek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
hrd7_17400 (recQ)
Messenger RNA biogenesis [BR:
lek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
hrd7_17400 (recQ)
DNA repair and recombination proteins [BR:
lek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
hrd7_17400 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
AAA_30
TniB
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
BCY17891
LinkDB
All DBs
Position
complement(1856259..1858556)
Genome browser
AA seq
765 aa
AA seq
DB search
MVPTPQSILKETFGYDDFLPRQKEVIENVLQKKDTLAIMPTGGGKSLCYQIPALLQPGLT
VVVSPLIALMKDQIDQLKQLGIPAVTLNSSLAASEYFKNTEKVLKGHSKLIYMAPETLRT
DRISSLLENVKVDLLVVDEAHCISEWGHDFRPEYREIINVRKSLKNVTCLALTATATQKV
RADIKKSLGFTDHNEFLSSFDRKNLIIEVVDKTNAVAQAVEMIEQYPGRPGIIYCFSRNQ
VDGLADELIRRKYSALPYHAGLDDAQRKKNQDAFIRDDVNIIVATVAFGMGINKPDVRYV
LHYDLPKSLEGYYQEIGRAGRDGQPATCRLLFSYGDKNKLQYIIRSKSGKERLAAEEQLD
AMLRYVEASGCRRKPLLAYFGETYKDEKCGHCDWCMAAEDKMVDITIPAQKFMSCVKRSG
EVFGVQHIVDILMGIETEKVKLHNHQALSTFGIGRDRTKKDWLTLADQLINLHFIEKAGE
YNSLKLTEPAMEALRSRQTITAVKPKPQRSLFDDYKDSPASGSRQSYGEPRGYSIGNQNY
GEPQTSSSVRRKRMPEVDNGLYEALRQLRKAIADREHIPPYAIFADRTLVEMAAYRPKNL
YSLKQIHGVGSVKSERFGDAFLKEIDRFCKEHKLEEIPKHGYSSPESLREINEKHPRFVN
VSKEFIQGTSIEDLARKHNVQPQTIFGHLVKYAKCGEIIPNPERFLTFSHVNPTIREKVL
KVFEEKGSESLTPAYSMLNGAVDFNELRVLQLYFICLKNRKKEKK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggtacctactcctcaatccatccttaaagaaaccttcggctacgatgacttccttccc
cgtcagaaagaggtcattgagaatgtacttcagaaaaaagatactcttgccatcatgccg
accggcggcggcaaatcgctgtgctaccagataccggctctcttgcagcccgggctgacg
gttgttgtttcaccgctgatcgcattgatgaaagaccagatcgaccagttgaaacaactg
ggcattccagcggtcacgttgaacagttcgctggctgccagtgagtacttcaagaacacc
gagaaagtgctcaagggccattctaagctgatctacatggcgcctgaaacactgcgcaca
gaccgcatctccagtctgctggagaacgtcaaagttgacctgctggtggtggacgaagcc
cactgcatctcggagtggggtcatgacttccggccggaataccgcgagatcatcaacgta
cgcaaatcgttgaaaaacgtcacctgtctggcattgacggctaccgccacccagaaagtg
cgcgccgatattaaaaaatcgctgggtttcacggaccataacgaatttctttccagtttt
gatcgcaaaaacctgatcatcgaagtagttgataaaaccaatgcggtggcacaggcggtg
gagatgatcgagcaatatcccggccggccgggcatcatctactgcttctcccgcaatcag
gttgacggactggcggacgaactcatccgccgcaaatattccgcccttccctaccatgcc
gggttggatgacgcgcagcgtaagaagaatcaagatgcctttattcgggatgatgtcaat
atcatagtggctacagtcgcgtttggtatgggcatcaacaaaccggatgtgcgttacgtt
ctgcattatgaccttcccaaaagcctggaagggtattatcaggaaatcggccgcgccggt
cgtgacggtcagccagccacatgccgcctcttgttcagctatggcgataaaaacaaactg
cagtacatcatccgcagcaaatccggcaaggaacgccttgcagctgaagagcagttggat
gccatgctgcgctatgtggaagcatccggatgccgccggaagccgttactggcatatttt
ggagaaacatacaaagacgaaaaatgcggccattgcgactggtgtatggctgctgaagac
aagatggtggatatcaccattccggcgcagaagtttatgtcatgcgtcaaacgcagcggt
gaagtcttcggagtgcagcatatcgtcgatatccttatgggcattgaaaccgaaaaggta
aagttacacaaccatcaggctctttcaacattcggtataggccgggaccgcaccaaaaag
gattggctcactctggctgatcagttgatcaaccttcacttcattgaaaaggccggtgaa
tataattcattgaaactgaccgaaccggctatggaagccctgcgctcccgccagaccatc
accgctgtcaaacccaaacctcagcgttccttatttgatgattacaaagacagtccagct
tcgggcagccggcaaagctatggtgaaccgcgcggatattcgattggtaatcagaattat
ggagagcctcagaccagttcttcggtcaggcgcaaacggatgccagaagtggataacggc
ctgtatgaggcactccggcaactccgaaaagccatagctgaccgcgaacacattcctcca
tatgccatcttcgcggaccggaccctggtggagatggccgcgtaccggccgaaaaacctg
tactcactgaagcagatccacggagtgggttctgtcaaaagcgaacgctttggtgacgcg
ttcttgaaagaaatcgaccgtttctgtaaagaacataaattggaagaaatacccaaacac
ggatattcaagtccggaatcgctgcgcgaaatcaatgagaaacatccacgttttgtgaac
gtttcaaaagaattcatccagggaacatcgatagaagatctggccagaaagcacaatgtt
caaccgcaaaccatttttgggcatctggtgaagtacgcgaaatgtggtgaaataattcca
aatcctgagcggttcctgactttttcacatgtaaatccgactatccgggaaaaagtgctg
aaagtatttgaagaaaaaggatccgaatctctcaccccggcttattccatgcttaatggc
gcggtggattttaatgaactgagggtcctccagctttatttcatctgcctgaaaaatagg
aagaaggaaaaaaaataa
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