Leptolinea sp. HRD-7: hrd7_24050
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Entry
hrd7_24050 CDS
T08293
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lek
Leptolinea sp. HRD-7
Pathway
lek03030
DNA replication
lek03430
Mismatch repair
lek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
hrd7_24050
03430 Mismatch repair
hrd7_24050
03440 Homologous recombination
hrd7_24050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lek03032
]
hrd7_24050
03400 DNA repair and recombination proteins [BR:
lek03400
]
hrd7_24050
Enzymes [BR:
lek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
hrd7_24050
DNA replication proteins [BR:
lek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
hrd7_24050
DNA repair and recombination proteins [BR:
lek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
hrd7_24050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
RNase_T
DEAD
DEAD_2
ResIII
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Helicase_C
AAA_30
SecA_DEAD
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BCY18556
LinkDB
All DBs
Position
complement(2582523..2585324)
Genome browser
AA seq
933 aa
AA seq
DB search
MTSIVSLDIETTGLDPVNDAIIEIGAVRFNGNRVEAEYSQMINPGRPIPPMITQLTGITD
EMVRREPPVKAIIQDFENFVGDCPILGHNIRFDLGFLRRQTRAFEYNDIIDTYELAAVFL
PTASRYNLGALQQLLSIPFPATHRALDDARATRGVYEKLIRKANELPIDLLAELVRHSDR
TDWIGSYALQQVLRARSREPIQARKTFHMPAGPLFEKPAGKINISAEPETGAASLDFDEV
AAVLEHGGPFAKFFDSYEYRPQQVEMLRAVTRSFSEGQHMLVEAGTGTGKSFAYLVPAAM
WALKTNTRVVISTNTINLQDQLINKDIPDLREALGVDLRATVLKGRSNYLCPRRLEMLRQ
RGPETAEEMRVLGKVLVWLNEGGTGDRNEINLNQSPEWDVWLRLSAEDEGCKSETCISRT
GGECPFYRSRQAAAIAHLIVVNHALLLSDVAAGSRILPEYKYLIIDEGHHMEEATTNALS
FKVSQNDFERLIHELGGPNSGLMGRLLVNLEGILQPSELAAVQTAVRQTTDLAFKITSLN
SQFFSAVDDFLTDQRDGKPMGTYPQQERIQNATRTLNSWNHVEEIWFDESELIKEMLGLV
SGLVRSGGDEEEDTNEDLLDVIGNLATLSTNFSEINRNVTNLVSKPDNLQIYWIEKQPGS
GKIGLQIAPLHIGPLMEENIWHQKTSVVLTSATLTTHGEFDYLRSRLNADEADELSLGSP
FDYENSALLYLINDIPEITDSYGYQKALESGLVRLAKATNGRMLVLFTSYAQLKKTSQAI
APAMTDAGIQIYEQGVGASANALLENFRGAEKAVLLGTRAFWEGVDIPGEALSVLAIAKL
PFDVPSDPIIASRSETFEDPFNEYSLPEAILRFRQGFGRLIRTQSDRGVVAVFDKRLLTK
KYGRLFLESIPECHKVTGTLAELPRTAAKWLNL
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgattgtttctctggatattgaaactaccgggcttgacccggttaatgacgcc
atcatcgaaattggcgctgttcggtttaatggcaaccgcgttgaggcggaatattcacaa
atgatcaatccggggcggccaataccaccgatgatcactcaattaaccggaatcacagac
gaaatggtccgccgggaaccgccagttaaagcaatcattcaagattttgaaaactttgtg
ggtgactgtccaatattgggacacaacatccgctttgatctggggtttttgcggcgtcaa
acccgggcgttcgaatacaacgacatcattgacacctatgaattggcggccgtttttctt
cccactgccagtcggtataatcttggcgcgttgcagcaattattgagcatacccttcccc
gccacccatcgcgcgttagacgatgcccgtgccacccgaggtgtatatgagaaattgatc
cgcaaggcaaatgagcttccgatagatctcttagcagaactggttcgccatagtgaccgt
accgattggatcggttcgtatgccttgcaacaggtgcttagagcccgttctcgtgaacca
attcaggccaggaagacgttccacatgccggctggtccactgtttgaaaaaccagccggt
aaaataaacatctctgccgaaccggaaaccggagctgcctcgctagattttgatgaagtg
gccgctgtactggaacatggggggccgttcgctaaatttttcgattcatatgaataccgc
cctcaacaggttgaaatgctgcgtgcggtcactcgttcattttcagaaggtcagcacatg
ctggtggaagccggtaccggaacgggcaagtctttcgcatatcttgttccagcagccatg
tgggcattaaagacaaacacccgcgtggttatatcaaccaataccatcaatctgcaagac
cagttgattaataaagatatccctgatctacgcgaagcccttggtgttgaccttcgcgcg
acagtactaaaaggccgttcaaattatctttgcccccggcgacttgaaatgttgcgccag
cgcggtcctgagacagcggaagaaatgcgcgttctgggtaaagtacttgtctggttaaat
gaaggcggcaccggtgaccgcaatgaaatcaacttaaaccagtcacctgagtgggatgtg
tggttgcgcctatcagccgaagatgaaggatgtaaatctgaaacatgcataagccgtact
ggcggtgaatgcccgttttaccgttcaaggcaggctgcagcgatagctcacttaattgtg
gttaatcacgccttacttttatccgatgtggcagccggtagccgtattttgccggaatat
aagtatttgatcattgatgaaggccaccacatggaagaagcaacgaccaatgcgctttca
ttcaaagtcagccaaaatgactttgaacgcctgatccacgagcttggggggccaaattcc
gggctaatgggtcgcttgctcgttaatcttgagggtatattacaaccttctgaattggca
gctgtacaaactgccgtcaggcaaacgactgacctggctttcaaaattaccagcctgaac
agtcaattcttctcagcggttgacgattttctcactgaccaacgtgatgggaaaccaatg
ggcacctatccccaacaggaacgcatccagaatgccacacgtactttaaattcctggaat
cacgtagaggaaatatggtttgatgaaagtgaattgatcaaagaaatgctgggactggtg
tcagggcttgtacgttcaggcggagatgaagaagaagacaccaatgaggacttattagat
gtcattgggaatctggcaacattgagcaccaatttttcagagatcaacagaaatgtaaca
aatctagtctcaaagccagataatcttcaaatttattggatcgaaaaacaacccgggtcc
ggtaagatcggacttcaaatcgctcctttacatatcggcccattaatggaagagaatatc
tggcatcagaaaaccagcgtggttctcacatctgcaacattgaccactcacggcgaattt
gactatcttcgcagccggctaaatgccgatgaagccgatgaattgtcactgggttcaccc
tttgattatgaaaattcggctttgctttatctgatcaacgatatacccgagatcaccgat
tcttacggttaccagaaagccctggaatccgggcttgtacgcctcgcaaaagccaccaat
ggtcgtatgttagtgctctttacttcttatgcccaattgaagaaaacatcacaggcaata
gctcctgcgatgacggatgccggaattcagatttatgagcaaggagtaggagcttcagcg
aacgcgcttcttgagaactttcgaggagctgaaaaagccgtcttactcggaacccgtgct
ttctgggaaggtgttgacattccgggcgaagcgttgtctgttctggctatcgccaagctc
ccgtttgatgttccttctgacccgatcatcgcttcacgatctgaaacatttgaggatcca
tttaatgaatattcactcccagaggctatactacgcttccgtcagggatttgggcgtcta
attcgcacacagtcagatcgtggcgtggtagcagtttttgacaaacgccttttgacgaaa
aaatatgggcgattgttccttgaatcaatccctgaatgccacaaggtgacaggcacgctg
gctgaattaccccgtacagccgccaaatggctgaacctttag
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