Leptolinea sp. HRD-7: hrd7_24830
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Entry
hrd7_24830 CDS
T08293
Symbol
groL1
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lek
Leptolinea sp. HRD-7
Pathway
lek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
hrd7_24830 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lek03019
]
hrd7_24830 (groL1)
03110 Chaperones and folding catalysts [BR:
lek03110
]
hrd7_24830 (groL1)
03029 Mitochondrial biogenesis [BR:
lek03029
]
hrd7_24830 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lek04147
]
hrd7_24830 (groL1)
Enzymes [BR:
lek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
hrd7_24830 (groL1)
Messenger RNA biogenesis [BR:
lek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
hrd7_24830 (groL1)
Chaperones and folding catalysts [BR:
lek03110
]
Heat shock proteins
HSP60 / Chaperonin
hrd7_24830 (groL1)
Mitochondrial biogenesis [BR:
lek03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
hrd7_24830 (groL1)
Exosome [BR:
lek04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
hrd7_24830 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
hrd7_24830 (groL1)
Exosomal proteins of breast cancer cells
hrd7_24830 (groL1)
Exosomal proteins of colorectal cancer cells
hrd7_24830 (groL1)
Exosomal proteins of bladder cancer cells
hrd7_24830 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BCY18634
LinkDB
All DBs
Position
2674979..2676610
Genome browser
AA seq
543 aa
AA seq
DB search
MGAKQIIFSDDARRKLKNGIDIVANAVSTTLGPKGRNVALDRKFGSPTITHDGVTVAKEI
ELEDPFENMGAQLLKEAATKTNDIAGDGTTTSTVLAHAIVTEGLKNLAAGSNPMLLKRGI
ETAAKAVAAEITKNAIEVTTKDEIANVATISAQDRVIGELIAEVMDKVGKDGVITVEESK
GLEFEKDYVEGMQFDRGYISPYFVTDSEHMESVIPEPYVLIYDKKISAAADIVPILEKLV
QIGKRDLLIIAEDIDGEALATLVLNKIRGMLNVLAVKAPGFGDRRKAMLQDIAILTGGQV
ISEETGRKLESVVISDLGRAEKVVSDKDNTTIVGGKGDEAEIKARIEQIKVEIDKTTSDY
DREKLQERLAKLSGGVAIIRVGAATETELKEKKHRVEDALSATRAAVEEGIVAGGGVALI
NAMSALDGVKMANEDEQIGVKIVRKALEIPMIKIAENAGKDGSVIVENVRQIQKSKKNKN
MGYDVLTDEFMDMVKGGVIDPAKVTRGALENAASIAAMILTTEALITDVPEKEKPAPMPP
PEY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctaaacaaattattttttccgatgatgcccgccgtaaattaaagaacggtatt
gacattgtcgctaacgcagtttccactacacttggcccgaaaggccgcaatgttgccctg
gatcgcaaatttggttctcctaccatcacccacgatggtgtaaccgttgccaaagaaatc
gaattggaagaccccttcgaaaacatgggcgcccagcttttgaaagaagctgccactaaa
accaatgacatcgccggcgacggtaccactacatccactgttctggctcatgccattgtt
accgaaggcttgaagaatctggctgccggttccaaccccatgcttttgaaacgtggtatc
gaaactgcggccaaagctgttgccgccgaaatcaccaagaatgccattgaagtcaccaca
aaagatgagatcgctaatgttgccaccatttccgcccaggaccgtgtcatcggtgaactg
atcgccgaagtcatggataaagtcggtaaagatggcgtcatcacagttgaagaatccaag
ggattggaatttgaaaaagactacgtggaaggtatgcagtttgaccgtggctacatttcc
ccgtatttcgtaaccgattcagaacatatggaatcggtaattcccgaaccgtatgtcttg
atctatgacaagaaaatctccgctgccgccgatatcgttcccattctggagaaactcgtc
cagatcggaaagcgcgatctgttgatcatcgccgaagatattgacggtgaagctctggct
accctggttctgaacaagatccgcggcatgctgaacgtactggctgtcaaagctcctggt
ttcggtgaccgccgcaaagctatgcttcaggatattgccatcttgaccggtggacaggtc
atctctgaagaaactggccgcaagctagaatccgtggttatctccgaccttggccgtgct
gagaaggttgtctccgataaagataacaccacaattgttggcggcaagggcgacgaagct
gagatcaaagcccgtatcgagcagatcaaagttgagatcgacaagaccaccagtgactat
gaccgtgaaaaactgcaggaacgcctggccaaactgtccggtggtgtggctatcattcgt
gtcggtgctgctacagaaactgaactgaaagaaaagaaacaccgcgttgaagacgcttta
tcggctacccgtgccgctgttgaagagggtatcgtggctggtggcggtgtcgcgctgatc
aacgccatgtctgctcttgatggcgtaaagatggccaatgaagacgaacagattggtgta
aagattgtccgcaaagccctggaaatccccatgattaaaattgcggaaaatgccggtaaa
gatggctcggttattgttgagaatgtccggcagatccagaaatcaaagaagaacaagaac
atgggttatgatgttctgaccgatgaattcatggatatggtcaagggtggtgtcattgat
ccggctaaagtgacccgcggcgctctggagaacgctgcctcaattgcggcaatgatcttg
accactgaagccttgatcacggatgttccggaaaaagaaaaaccggctcctatgccgcct
ccggaatactaa
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