Leptolinea sp. HRD-7: hrd7_25660
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Entry
hrd7_25660 CDS
T08293
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lek
Leptolinea sp. HRD-7
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lek03016
]
hrd7_25660 (truB)
Enzymes [BR:
lek01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
hrd7_25660 (truB)
Transfer RNA biogenesis [BR:
lek03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
hrd7_25660 (truB)
Prokaryotic type
hrd7_25660 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BCY18717
LinkDB
All DBs
Position
complement(2751198..2752109)
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AA seq
303 aa
AA seq
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MYEESFNVNNAISGVLVVDKPVGLTSHDVVQIIRKGTNIRRAGHTGTLDPRASGVLVVLL
GPAVRLSEYVSASDKRYQAVIRLGQSTDTYDSEGRITGGSSPVNITEDQFENELKSFIGE
IEQVPPPYSAIKVKGKKAYDMARDGEEFDLAPRTIHVYNLDLLEWAPPEAVVDVYCSSGT
YVRSLAHDLGEKLGCGAHLVGLRRTKSGRFTLRDAVPLRKLRESFDAGNWYQYLIPAAEA
LSDWPALELSNDQVEAVRHGIKIPSPALSSNWARGINEQGELVALMEFSPETNEWQPKKV
FFS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggaatccttcaacgtaaataatgccatttccggcgttctagtcgttgacaaa
ccagtgggtttaacatcacatgatgtagtccagattatccgtaaaggaacaaatattcgt
agagctggacatactgggacattagatccccgggcttctggcgtattggtagtgttactg
ggccctgctgttcgcttaagtgaatacgtttctgcttcagataaacgctatcaagctgta
atacgccttgggcagtctaccgacacgtatgattcagaaggacgtattactggcggctct
tcaccggtcaatattacagaagatcaattcgagaatgaattgaaatcctttattggtgag
atcgaacaggtaccacctccgtattcagcgataaaagtaaaaggcaaaaaagcctatgac
atggcccgcgatggtgaagaatttgacctcgctccccgcaccattcatgtttataacctt
gatcttcttgaatgggctccacctgaagcagtggttgatgtatattgttcttcaggaaca
tatgtcagatcacttgcccacgaccttggtgaaaaattgggttgtggtgcgcacctcgtt
ggtcttcggcgcacaaaaagcggccggtttacattgagagacgctgtacctcttcgcaag
cttcgcgaatcgtttgacgccgggaattggtaccagtacctgattcctgcggcggaggca
ctttctgattggccagccctggaattatcaaatgaccaggtggaagccgtgcgtcatggc
ataaaaataccttcccccgccctttcatcaaactgggctcgtggaattaatgaacagggc
gagcttgtagctctaatggaatttagccctgaaaccaatgaatggcagcccaaaaaggtg
ttcttctcctga
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