Leptolinea sp. HRD-7: hrd7_26170
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Entry
hrd7_26170 CDS
T08293
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lek
Leptolinea sp. HRD-7
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lek03009
]
hrd7_26170 (rimO)
Enzymes [BR:
lek01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
hrd7_26170 (rimO)
Ribosome biogenesis [BR:
lek03009
]
Prokaryotic type
ribosomal protein modification factors
hrd7_26170 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
BCY18768
LinkDB
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Position
complement(2808558..2809892)
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AA seq
444 aa
AA seq
DB search
MKKKTFYIESLGCAKNTVDSESMSDLLFRDGYTVVEKASQAEVLLVNTCGFISAAREESL
NSLRALSEKKKEGQILIAAGCLPQRDRELIVKEVPGVDGVLSTRRWMDILEIVEKIKNSG
NRTIPVYNIPDAARIGTDEKGVLRAAIQGTSAYLKIADGCRRLCAFCSIPLIKGTAVSRP
METILQETVFLEQNGIKEINLIAQDVTDYGTDLGIKDALPELLEKIHQTSPNIPWVRLLY
AYPGAVSDRLITQLCENQVVLPYLDIPLQHAHPDTLKRMKRPSNMEWVYSTIEKLRRGNP
DIALRTTFIVGYPGETDKEFDTLLNFVREIKFDRVGVFTFSFEPGTSSEPLGDPIPAELK
EERFNLIMAEQEKISLAKNQGLYGKELDILVEGVDKDISVGRSYRDAPEIDGLVIVQGNL
PIGEISKVQVTGAMAYDLIARPVQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaagactttttatattgaatcgctcggatgtgcgaaaaacacagtagattct
gagtccatgtcagatttactttttcgagatggatacactgttgttgagaaagcttcacag
gctgaagttcttcttgtgaatacctgcggttttatatcggctgcccgtgaagaatcgctt
aattctcttcgtgccttatctgaaaagaaaaaagaaggacagattttaatcgcggcaggt
tgcctccctcaacgtgacagggaactgatcgttaaggaagtgcctggagtggacggagta
ttaagcacccgtcgttggatggacatactggagattgtagaaaaaatcaaaaattccggt
aacagaacgattcccgtctataacattcccgatgcagccagaatcggtacggatgaaaaa
ggggttctgcgtgccgctatccagggaaccagtgcctatttgaaaattgcagacggttgt
cgtcggctttgcgctttttgttctatcccgttgatcaagggaacggctgtcagccgcccg
atggagaccattctgcaggagaccgtctttcttgagcaaaatggcattaaagagatcaat
ttgattgctcaagatgtcactgattatggtaccgatctgggaataaaggatgcacttcca
gaacttcttgagaagattcatcagacatccccaaatattccctgggtcagactgttgtat
gcgtatccgggcgcggtatcagaccgtttaattactcagctatgcgaaaatcaggtagtt
ttaccatatcttgatatccctctgcagcatgctcatcctgatactttgaaacgaatgaag
cgcccttcaaatatggaatgggtatattccacaattgagaaactccgcagaggcaatcca
gatatcgctctgcgaacaaccttcatagtcgggtatccgggtgagacagataaagaattc
gataccctcttgaattttgttcgtgagattaagtttgaccgcgtaggagtgttcacgttt
tcctttgaaccgggcaccagtagcgagccactgggggacccgataccggctgaacttaaa
gaagaacgttttaatttgataatggctgagcaggaaaagatttcactggcgaaaaatcag
ggattgtatgggaaagaattggatattcttgtcgagggtgtggacaaggatatatccgtc
ggacgtagctatcgcgatgctcctgaaattgatggtctggttattgtgcaaggcaatttg
cccattggtgaaatatcaaaagtccaggttaccggggctatggcgtacgatctgatcgcg
cgtcctgtacaataa
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