Leptolinea sp. HRD-7: hrd7_26250
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Entry
hrd7_26250 CDS
T08293
Symbol
uvrA_2
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
lek
Leptolinea sp. HRD-7
Pathway
lek03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
hrd7_26250 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lek03400
]
hrd7_26250 (uvrA_2)
DNA repair and recombination proteins [BR:
lek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
hrd7_26250 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
hrd7_26250 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
AAA_15
nSTAND1
AAA_25
AAA_23
DnaJ_CXXCXGXG
nSTAND3
RsgA_GTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
BCY18776
LinkDB
All DBs
Position
2817274..2820156
Genome browser
AA seq
960 aa
AA seq
DB search
MSQDVIRVIGAREHNLKNITVEIPRDKLVVITGLSGSGKSSLAFDTIFAEGQRRYVESLS
SYARQFLGQMDKPDVDSIEGLSPAVSIDQKATSHNPRSTVGTVTEVYDYMRLLFSRVGIP
HCPVCGREVQRQSAQEIVDAVQSLPDGTRILILAPLVRGRKGTYQNIFDDIQKMGFVRAR
VDGQVVNLEDEITLDRFKIHTIEAVVDRLVISHATEATEEKSILSRLTDSIETALKIGEG
YLTIQNLSSDPAHDLFFSEHLACPEHGVSLPEIEPRTFSFNTPHGACPDCEGLGNRLEID
PDLLIPDRDRSLNDGAIIAMEWSNSKDQGGYYWQMLEAVADHYKIDLDVPVSQIPEEKLK
LILYGTGKQEVTMNMVGRNDRKTTFETSFEGIIPNLERRFRETSSEYIRSKISEFMSDRP
CPTCNGTRLRREALAVTVDGKNIVEVTTWPIITTLNWIKQLMDEDSCLTNRQKAIAERVL
KEIRERLGFLVDVGLDYLTLRRSAGSLSGGEAQRIRLATQIGSRLMGVLYVLDEPSIGLH
PRDNDRLLATLKGLVTLGNTVLVVEHDDETIRAADWIVDLGPGAGEHGGQIISAGTVDHI
LNDEKSITGAYLSGRKCIPIPMKRRKGNGKELVIYGARANNLKNLNVHIPLGVLTCITGV
SGSGKSTLMVDILYAEMSKQLYGSHTQPGEFDRLEGLEHLDKVINIDQSPIGRTPRSNPG
TYTGLFDEIRQLFAELPESKMRGYKSSRFSFNVHGGRCEACQGQGQLRIEMQFLPDVYVP
CDVCHGARFNRETLQVKFKGKTIADILDTTVEEGIEFFANFPTIQNKLKTLLDVGLGYVR
IGQPGTTLSGGEAQRVKLAKELSRRATGKTFYVLDEPSVGLHAADVHKLIEVLQKLVDNG
NSVLIIEHNLDIIKVADHIIDLGPEGGDRGGQLLGCGTPEEIAKIDASYTGQFLKKILSV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagatgtgattcgggtaattggagcacgggaacacaatctgaaaaatatcacc
gttgagataccccgtgataaattggtagttatcaccggattatccggttccgggaaatct
tctctggcatttgacactatcttcgcggaaggacagcgacggtatgttgaatctctgtca
tcttacgcacgccaatttctggggcagatggataaaccggatgttgattcaatagaagga
ttatctccggcagtatccattgatcagaaagctacctcgcataatccgcggtcaacagta
ggaacggtgacagaagtatatgattatatgaggttattattctctcgtgttggtattcca
cattgcccggtatgtggaagggaagtgcagcggcagtcagcgcaggaaattgtggatgcc
gtgcaatctctgccggatggaacacgaattttgatactggcgccgctggttaggggacgt
aaagggacataccagaatatttttgacgatattcagaaaatgggtttcgttcgagcccgg
gttgacggacaggtggtcaatctggaagatgaaatcacgctagaccgtttcaagatccac
actattgaagctgtggtagacaggctggtgatttcacatgccactgaagctacggaagag
aaatctatcctttcaaggttaacggattcgattgaaacagctttgaaaattggtgaagga
tatttgactattcagaaccttagctccgatcctgcccatgatctttttttcagtgaacat
ttagcctgtccagaacacggtgttagtctgccagaaatcgagccgcgcacgttttcgttt
aatactccacacggcgcctgtccagattgcgaaggattaggaaaccgtttggaaattgac
cctgatcttcttatcccggatcgtgatcgatcactcaatgatggcgcaattatcgctatg
gagtggagcaattcgaaagaccagggtgggtactactggcagatgttagaagctgtcgcg
gatcattacaagatcgacctggatgtccccgtaagtcaaataccggaagaaaaattgaaa
ttgatcctttatgggacaggaaagcaggaagtcaccatgaatatggtcggacgaaacgat
cgaaagaccacttttgagacttcctttgaaggaatcatccccaaccttgaacggcggttc
agagagacatcctctgaatatatacgaagtaagatcagtgaatttatgagcgaccgtcca
tgtccgacctgtaatggtaccaggctgcgacgcgaagcgttggctgtaactgtagatgga
aaaaatatcgttgaggtaactacgtggccgattatcaccacattaaactggatcaagcag
ttgatggatgaagacagttgcctgacaaatcgccagaaagcaatagcggaacgagtattg
aaagagatacgggagcggttaggcttcctggtggatgtggggctcgattacctgacattg
cggcgatcagccgggtcactttccggtggtgaagcgcagcgcatccggctggccacacag
atcggatcacggctgatgggtgtgctttatgtgttggatgaaccctctattggacttcat
ccgcgggataatgaccgtcttctggccacattgaagggattggtaactctgggaaacacg
gtactggtagtggagcatgatgacgagaccattcgcgcagctgactggatcgtcgacctt
gggcctggtgccggggaacatggcggacagatcatatcagccggcaccgttgaccatatt
ctcaacgatgaaaaatcgattaccggcgcttacctgagcggacggaagtgcattcccatc
ccgatgaaacggcgcaaaggaaatgggaaagaattggtgatttatggcgcgcgtgccaat
aatctgaagaatctcaatgtgcatattcctctgggggttttgacctgcataaccggtgtt
tcaggttcaggtaaaagtacattaatggtggatattctgtatgctgagatgtcaaagcag
ctttatggttctcatacccagcctggcgaatttgaccggttggaaggtttggagcatctg
gacaaggttataaatattgatcagtcgcccatcggccggacgccgcgctccaatccggga
acgtataccggactgttcgacgaaatacgccaacttttcgcggaattgccggaaagtaaa
atgcgagggtataaaagcagccgcttctcatttaacgttcacggcggacgctgtgaagcc
tgtcaggggcagggtcagttacgtatagagatgcaattcttaccggatgtttatgtaccc
tgtgatgtctgccatggagcacgatttaatcgcgagacattgcaggtgaaatttaaaggg
aaaactatcgcggatattctggatacgaccgttgaagagggtatcgaattttttgccaat
ttcccaacgattcaaaacaaattgaagacattgcttgatgtcgggcttggctatgtgcgg
ataggacagcctggcacaactctttccggtggtgaagcgcagcgcgtaaaactggcaaaa
gagctgtcacggcgcgcgacaggaaaaacattctatgttctggatgaaccttctgtgggc
ttacatgccgctgacgttcacaaattgatcgaagttctacaaaaattggtggataacggg
aattcggtgctgatcatcgaacacaacctggatattatcaaagtggctgatcatattatt
gatctggggccggaaggcggagatcgcggtggacaattgctgggttgtggaacaccggaa
gagatcgcaaagatcgatgcttcttatacaggacaatttttgaaaaaaattctgtctgtc
tga
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