Leptolinea sp. HRD-7: hrd7_27550
Help
Entry
hrd7_27550 CDS
T08293
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
lek
Leptolinea sp. HRD-7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_2
Mg_chelatase
MCM
AAA_5
TIP49
RuvB_N
AAA
AAA_16
AAA_19
AAA_14
nSTAND3
AAA_22
AAA_7
DUF6033
GAF_3
bpMoxR
AAA_3
T2SSE
AAA_30
VpsR
Phage_T7_Capsid
LIS_MGM1
Motif
Other DBs
NCBI-ProteinID:
BCY18906
LinkDB
All DBs
Position
complement(2962715..2963884)
Genome browser
AA seq
389 aa
AA seq
DB search
MSTNVLIVDDEENARKNIGEYLTAKGYEVTGAGTLREARDLINTGVGDVILLDVQLPDGY
GPNLLYEVNSLPARPPIIVITGYGDIEMAVDVMKNGAHDFLTKPINMQHLEQSIERAQEI
VAMRRELAYLREKQSNINFVVGKSDKMKTVIEHAVRAAQASVSVLITGETGTGKEVLAQF
IHKSGPRSSKQFVAINCAAIQPTVLESELFGHEKGAFTGADVRKHGLMEIADSGVLFLDE
ISKMPLEMQSKLLRAVEEKSIRRVGGTSTNKIDIQIVSASNRDLKKMMSDGEFREDLYYR
LKVVDLELPPLRERKEDIPELVGFFIREQNARQGLNISDISPRALQALTAYDWPGNIREL
SHVIERAMLFCDDPVLDLNHLPSDVTRTK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaatgtattgattgttgatgacgaagagaatgcgcggaaaaatattggtgaa
tacctgacagccaaagggtatgaggttacaggagccggcacattaagagaagctcgtgat
ctgatcaacactggagtgggggatgtaattttgttggatgttcaacttccagatggttat
gggccaaatttattatatgaagtaaactcacttcctgcccgtccgccaatcattgtgatc
accggttacggtgatattgaaatggctgttgatgtaatgaaaaatggtgctcatgacttc
ctcaccaaaccgatcaatatgcagcatctggaacaatcgattgaacgggctcaagagatc
gtcgcgatgcggcgagaactggcttatttgcgtgaaaaacagtcaaacatcaactttgta
gttggcaaaagcgataagatgaagaccgtaattgagcacgcggttcgcgccgctcaagca
tctgtctcggtattgatcaccggtgaaaccggaacaggtaaagaagttctggcacaattc
attcataaatcaggtccgcgttcatcaaaacaatttgtggccataaactgtgctgccatt
cagccgacagtgctggagtctgaactttttggacatgaaaaaggagcgttcaccggggca
gatgtacgaaaacatggccttatggaaatcgccgatagcggtgtattgtttttggatgag
atatcaaagatgccattagaaatgcaatctaaattgctaagggctgtggaagaaaaatct
atccgccgggtaggtggtaccagcaccaataaaatcgacattcaaattgtctccgcatca
aaccgcgacttgaaaaagatgatgagtgatggagaatttcgcgaggatttgtattaccgg
ttaaaagtagttgatcttgaactacctcctttacgagaaagaaaagaagatattcctgaa
ttggtgggattttttatacgcgaacaaaatgcccggcagggattgaatatatctgatatt
tctccccgtgcacttcaggcgctgactgcctatgattggcccggcaatatacgcgaattg
agtcatgtcattgaacgcgctatgttgttttgcgatgatccggttttggacctaaatcac
cttccatccgatgtgacaagaacgaaataa
DBGET
integrated database retrieval system
