Leptolinea sp. HRD-7: hrd7_27570
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Entry
hrd7_27570 CDS
T08293
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
Organism
lek
Leptolinea sp. HRD-7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
HTH_11
Sigma54_AID
CENP-B_N
HTH_12
zinc-ribbons_6
Ribosomal_L32p
Motif
Other DBs
NCBI-ProteinID:
BCY18908
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Position
complement(2965832..2967238)
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AA seq
468 aa
AA seq
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MFQTHQQSLRPLTTAHLAQTMTLLSLTADELREQIESELASNPALELIEERRCPTCHRLL
APHAMCPTCSSPRSDAADEPIVFVSPREDFNFSSGVNSEEMPEDNYSSTTEDLPTFVLRQ
IASELDGSERAIAAYFLTHLDDDGLLSIPLVEIARYFHVPLSKVEGIQRKIQHAEPYGVG
SCSPQEALLVQLDLLGESHDIPVLARPMIEKEMGLLSRHQYAELARAFKVSLRTVHQAVA
FISENLNPFPARSHWGDVRQSTETPPQVYHRPDILISYLNDDPTKPLLIEIIMPLNGTLR
VNPMFRSAIHEAEQEKKDDWKNDLERASLFVKCLQQRNHTITRLMQRVAGLQRNFICHGE
KYLKPVTRASLSVELGVHESTISRAVANKAVQLPNGRIVPLAMFFDRSLNVRKVLKEIIE
KEGRSLSDTEIADLLSQQGYQVARRTVAKYRAMEGILPAHLRRPTPGV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaactcaccaacaatctcttcgaccattaactaccgcccatctggcacaaacc
atgacgttattaagcctgacggcggatgaacttagagaacaaattgaatctgagctggcc
tcaaacccggctctggaattgattgaagaacgccggtgccctacctgtcaccggctgttg
gcgccgcatgcaatgtgtccgacatgcagttcacccaggtctgacgcggctgatgagcca
attgtatttgtctctccacgtgaagattttaactttagttcaggtgtgaacagcgaagaa
atgccggaagataattattcttccacaacggaggatttgccaacatttgtcttgcgccag
attgcttcggaattagatggatctgagcgggccattgctgcatattttctaacccatttg
gatgacgatggattgctttccattccgctggtggaaattgctcgttattttcatgttccc
ttgtcaaaagtggaaggtatacagagaaaaattcaacatgctgaaccgtatggtgtgggt
tcatgttcgcctcaagaggcgttgttggttcaattggatttactgggggaatcgcatgat
ataccggttctggcccggccaatgatagaaaaagaaatgggtttgctttcacgtcaccag
tatgctgagttagcccgcgcctttaaggtaagtttgcgcacggtgcatcaggcggttgcc
ttcattagcgaaaacctgaatccgtttccggcgcgttctcactggggcgatgtgcgtcaa
tctactgagacacctccccaggtttatcaccggccggatattctgatttcatatctgaat
gatgacccaaccaaacctttgttaattgaaatcatcatgccgttgaatggtacattacgg
gtcaacccgatgttccgatcggctatccatgaagctgagcaggaaaagaaagatgactgg
aagaacgatctggaacgcgcctcattatttgtcaaatgcttacaacagcgaaatcatacc
attacgcggttgatgcagagagttgcaggattgcagcgaaattttatctgccacggcgag
aagtaccttaagccagtcactcgcgcatcgctttcggttgagcttggagtgcatgaatcg
accatttcacgggctgtggcgaacaaagccgttcaattacccaatggacgaatcgtacct
ctggccatgttctttgaccgatctttgaatgtacgcaaagtattaaaagaaatcattgaa
aaagaagggcggtcgttgagcgatactgaaattgccgatcttctttcgcaacagggatat
caggtagcccgccggactgtagccaagtatcgcgccatggagggtatcttgcccgcgcat
ctgaggagacccacgcccggagtttga
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