Leptolinea sp. HRD-7: hrd7_29140
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Entry
hrd7_29140 CDS
T08293
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
lek
Leptolinea sp. HRD-7
Pathway
lek02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lek00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
hrd7_29140 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lek03021
]
hrd7_29140 (sigA_2)
Transcription machinery [BR:
lek03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
hrd7_29140 (sigA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
HTH_25
DUF7785
HTH_3
DUF6891
CMD
HTH_31
ATP-cone
FAM176
Motif
Other DBs
NCBI-ProteinID:
BCY19065
LinkDB
All DBs
Position
3144454..3145671
Genome browser
AA seq
405 aa
AA seq
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MDDAILHVVDEDEEYSAIARLIELGRQKSFVTIDDILHFFPEAEQDVEQLEEAFAALLSA
GINYIEEPSAIEEPAEDELSFEEEEAAEEEQGQTTYFDDLANIDTDDTIGLYLKEVSRVP
LLTAEEEVELAQRIERGRMAREELAKGNVTTKRRLELRHLIEDGWAGREHLITANSRLVI
SVAKKYMGRGVPFLDLIQEGNIGLIRATKKFDYRRGHKFSTYATWWIRQAVTRAIADQGR
TIRVPVHMGDQINKLLRVQHQLTQRLGREPSVEELADALEVPPKKVENMIQVARRPLSLE
TPTDDEEDSVLGDFIEDDEAPPPDDTATYNLLKEHLEDVLNSLPPREVRILQLRYGLLDG
QAYTLEEVGRKMGVTRERVRQIEAQALSRLRHPTIRRRLRDYLGE
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgcgattttgcatgtagttgatgaagatgaagagtattctgcaattgctaga
cttattgaacttggccgccagaaatcttttgtaaccatcgacgatattcttcatttcttt
ccagaagctgaacaagacgtggaacagcttgaagaagcttttgccgctcttttaagcgcg
ggaattaactacattgaagaaccatcggccattgaagaaccggcggaagacgagctttct
ttcgaagaagaagaagcggccgaagaggaacaggggcaaaccacgtattttgatgatttg
gccaatattgatactgacgacacaatcggcttgtatctaaaagaggtaagtcgtgttccg
ctgctaaccgcggaagaggaagttgagctggcacagcgcattgaacgcggacgcatggca
cgtgaagaactggccaaaggcaatgtgaccacaaaacgccgtcttgaattgcgtcatttg
attgaagatggttgggctggcagagagcatctgattaccgccaattctcgtcttgtgatt
tctgtggccaaaaagtatatggggcgtggtgttcccttccttgatcttattcaagaagga
aacataggactgatacgcgcgaccaaaaaatttgactaccgccgtggtcataaatttagc
acctatgccacatggtggatccgacaggctgtcacccgggccattgcggatcagggtcga
accatccgcgttcctgtccacatgggtgaccagatcaataaactactgcgtgttcagcac
cagttgacacagcgccttggccgcgaaccatctgtggaagaactggccgatgccctcgag
gtcccccccaagaaagtggaaaacatgatccaggtggctcgccgtccgttgtcactggaa
acgcctaccgatgacgaagaagactcagttctcggagatttcattgaagacgatgaagct
cccccgcccgatgacaccgccacatacaacctccttaaagaacacctggaagatgtattg
aactctcttcccccgcgagaagtgcgaatcctgcagttgcgttacgggctgttagatgga
caggcatacacgctcgaagaagttggccgcaagatgggtgttacccgtgaacgggtgcgc
cagattgaagcccaggctttaagccggcttcgtcacccgaccatccggcgacgccttcgc
gattacctgggtgagtaa
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