Leptolinea sp. HRD-7: hrd7_29470
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Entry
hrd7_29470 CDS
T08293
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
Organism
lek
Leptolinea sp. HRD-7
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
CCDC39
AAA_21
AAA_15
AAA_29
Filament
ERM_helical
BLOC1_2
DUF4200
ABC_tran
DUF6673
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
BCY19098
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Position
complement(3181930..3185538)
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AA seq
1202 aa
AA seq
DB search
MPPRLKSLELHGYKTFASQVLFEFPGVVTAIVGPNGSGKSNIADSLRWVLGEQAFSLLRG
RKTEDMIFSGSEQRARAGMASATITFNNEDGWLPIDYSEVSITRRAYRDGQNEYLLNGQK
VRLKEISELLALSGLAERTYTIIGQGLVDAALSLKPEERRRFFEEAAGIGLYRGRREESL
SRLEATRRNLVRVQDIVSELEPRLVSLERQARRAIEYEQIKNDLRLLLRDWYGYHWNLTQ
KSVRRDHDILRSYEANLEKNRDALNEFDIVLNQKKQRLSDVRHQLSEWHSQLASLHSREE
ALLREVAVKQERKRSLLEREMSLQNELAKREEEINSRRKSLQEMTDEVERLQAELDEAQL
QSEQVTGQLEKLQGERQACEEDVRVTRRKMVELETANVKLQAHRNEIISRTESLKNSLSG
FETGIADEEKKLEELKQVEKSTRSERERAEEDLQNLAEEVTETRRKITEAEAQRREQQEA
LNKLESRRAQLNGQLKALIEAENAFSGLAGGAKAVLQQAKNGQLRGKYSALTSLLEVPKE
YEQAIAAVLGEFLDAIYLADDADEDQAVSWLGTSDQGRAALLPVSALVDSQPKSNPASMD
GVVGLASDLVKAPPGLKKVIQAALGNAWVVKDRQTARRVARGKENNTRAVTLNGEVFLSN
GAVIAGREGRGSIISRPRERKELEAVLTQVEEDLNEADERIAKLDGDLRSLREEETRLQK
NRQQVEEITRKLDQKAQKALLELNQLNQQVNWKKQQIEHQKKQIESANDELVKLDQSIVA
NQNSIQEISVQLKEKNNALARLSLDEIQSQVFHWNTTVAVSRKARQEAERRLADQRTIID
RTIQQVNDLKAQIDGLLNERRTIDLEVNRQSEAIDEINKQTELLDEKITPAEKDLAQLDK
EYNDLQSDLLTSQQKVTAAERAVAQAKLEYARSKDAVDNLRKKIEEDMGLVILEYSEDMA
AQSPLPLDGWVEQLPNITEIPPEMEESINRQKAHLRRMGAVNPEAQAEYQSVVERYEYLK
TQIDDLKKADEDLCKIIEELDDVMERDFKQTFHKVAAEFEKMFTRLFGGGSAKLILTDEN
NFTETGIDIEARLPGRREQGLSLLSGGERSLTAVALVFSLLKVSPTPFCVLDEVDAMLDE
ANVGRYRDLLRELANQTQFLVITHNRNTVQAADVIYGITMGRDSASQVISLRLDDIPIDM
VK
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgccaccacgattgaaatctctggagttgcacgggtataaaacctttgcaagccaggtt
ttgtttgaatttcctggagttgttacggctatagtagggccgaacggttccggcaaatcc
aatatagccgattcccttcgctgggtgctcggtgaacaggcgtttagcctgctgcgcggc
cgtaagacagaagatatgatcttttccggttccgaacagcgtgctcgcgcgggaatggca
tcagccacaattacattcaataatgaagacggctggctgcccattgattattctgaagta
tccatcacccgccgcgcctaccgcgacgggcagaatgaatacctcctgaacggtcaaaag
gtgcgtttgaaggaaatttccgaattgctggctctttccggcctcgctgaacgcacatat
accattatcgggcagggacttgtggatgccgctctgtcattgaaaccggaagaacgcagg
cggttctttgaagaggcggccggtatcggtctgtatcgcggaaggcgggaagaatcgttg
agccggctggaagcaacacgtcggaacctggtgcgtgtgcaggatattgtcagcgaactg
gaacctcggttggtttctctggaacgacaggccagacgggctattgaatatgaacagatc
aaaaatgaccttcgcctgttactgcgtgactggtatggatatcactggaacctcactcag
aagagtgtccggcgagatcatgatattttgcgttcctatgaagccaatctcgaaaagaac
cgagacgcgctaaatgaatttgatattgttttaaatcagaaaaaacagcgcctgagtgac
gttcgccatcaactttcagaatggcacagtcagttggccagtctgcacagtcgtgaagaa
gctctgttacgcgaagtcgcggtgaagcaggagcgtaagcgttctcttcttgagcgagaa
atgtctctgcaaaatgaactggcaaagcgcgaggaggaaataaactctcgccgcaagagt
ctgcaggagatgactgacgaggttgaacgccttcaggcagaattggatgaagcccaatta
caatctgagcaagtgaccggccagctggaaaagcttcagggtgaacggcaggcatgcgaa
gaagatgtacgtgtcacccgccgcaaaatggtggaacttgagacggcaaacgtaaaactg
caggcgcatcggaatgagatcatatcgcgaacagagtcattaaaaaacagtctgtctgga
tttgaaaccggaatcgcggatgaagaaaaaaaactggaagaattgaaacaggtagagaag
tctacccggtctgaacgcgagcgagcagaggaagatctccagaatctggcggaagaggta
accgaaacccgtcgtaagatcacagaagctgaagcacagcgccgtgagcaacaggaagct
ctgaacaagttggaaagccggcgcgcgcagttgaacggccagttgaaagccttgatcgag
gcggaaaatgccttcagtggactggccggaggcgcaaaagccgtattgcagcaggcgaag
aatgggcaattacggggaaaatattcggcactgaccagtctcctggaagtgcctaaagaa
tatgagcaggcaattgccgcggttttaggcgaatttctggatgctatttatctggcggat
gatgctgacgaagaccaggctgtcagctggctgggcaccagcgaccagggcagggcggca
ttgttgccggtatccgctctggtggattcgcagccaaaaagtaatccggcttccatggat
ggagtagtcgggttagccagtgacctggtgaaagctcctcccggattaaagaaagtaatc
caggccgcgctggggaatgcctgggtggttaaagaccgtcaaacagcccgccgggtagcc
cgaggaaaagaaaacaacacccgcgccgttacattaaatggtgaggttttcttaagcaat
ggggctgttattgcagggcgtgaaggacgcggcagcattatcagccggccgcgtgagcgc
aaggaactggaggcggtgctgactcaggtggaagaagacctgaacgaagcggatgaacgg
atcgcaaaattagacggcgatctgcgttctcttcgcgaagaagaaacccgtttacagaaa
aatcgtcaacaggtggaagagatcacccgcaaacttgaccagaaggctcagaaggcattg
cttgaactaaaccagttaaaccaacaggttaactggaaaaaacagcagatagaacaccag
aaaaaacaaatcgaatcggcgaatgacgaactggtgaaattagaccagtcaatcgttgcc
aaccagaattccattcaagagatcagcgttcaattaaaagaaaaaaataacgcgctggcc
cggttgagccttgatgagatacaaagccaggtatttcactggaacactactgtggctgtt
tcacgaaaagctcgccaggaagcggaacgacgtctggctgaccagcgaaccattattgac
cggactatccaacaagtgaatgatctgaaagcgcagatcgatgggttattaaatgaacgc
cggactattgacctggaggtcaaccggcaaagtgaagcaattgatgaaataaacaaacag
accgaattgttggatgagaagatcactccggctgagaaagatctggcacagctcgacaag
gaatacaacgacttgcagtcagacctgctgacatctcagcaaaaagttactgccgcagaa
agggctgttgcgcaggcaaaattggaatatgcccgcagcaaagacgcggtagataacctc
cgcaaaaagatcgaagaagatatgggccttgttatccttgagtattcggaagacatggcg
gcgcagtcaccgttaccgttagatggttgggtggaacaattacccaatatcacagagatc
ccacctgaaatggaagagagtatcaacaggcagaaagcacatctacgccggatgggtgct
gtcaaccctgaagcacaggctgaataccagtcagtggtggaacgttatgaatatttaaaa
actcagattgacgacctaaagaaggctgacgaggacctgtgcaagatcatcgaagaactt
gatgacgtaatggagcgcgattttaaacaaactttccataaggtggctgcagagtttgaa
aaaatgttcacccggttgttcgggggtggaagcgcgaaattgatcctcactgatgagaat
aattttaccgaaaccggtattgatatagaagccaggctgcctggcagacgggaacagggg
ctttctctgttatcaggtggggaacgcagccttacggcggtggcgctggtattctcgctg
ctgaaagtttcaccgactccgttttgcgtactggatgaagttgacgcgatgttagacgaa
gccaatgtgggtcgctaccgagacctgttgcgtgagctggcaaaccaaacgcagttcctg
gtgatcacacacaaccgcaatactgtacaggcagcggatgtgatttatggaattactatg
ggacgagactcggccagtcaggtgatcagtctgcgtctggacgatataccaatcgacatg
gttaagtaa
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integrated database retrieval system
