Lodderomyces elongisporus: PVL30_000152
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Entry
PVL30_000152 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K20409
SEA/GATOR complex protein SEA3/WDR59
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_000152
Membrane trafficking [BR:
lel04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
PVL30_000152
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_16
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EIPR1
WD40_CDC20-Fz
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
CFAP251_N
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WD_LRWD1
Beta-prop_Vps41
Beta-prop_WDR75_1st
ASA1
WD40_RFWD3
zf-rbx1
WDR90_beta-prop_4th
zinc_ribbon_16
Beta-prop_TEP1_C
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
5235514
NCBI-ProteinID:
XP_001527637
UniProt:
A5DS21
LinkDB
All DBs
Position
1:444187..448545
Genome browser
AA seq
1452 aa
AA seq
DB search
MIGGALSNPYESPTFGTALSLRIDGGVGAMSLSPTGRDAVLAGRKGLYVIDLDDPFTPPR
WLHHITSWEVADVQWSPHAFQKPSWCISTSNQKALLWDLNRPSTNAIVNVLHAHTRAITD
INFHPTHPEMLATCSVDTMIFNWDMRTPRKPVSKFAHFRAGTIQVKYNWENAYELGSTHD
NELWIWDTRKGALPIATIVDAHEGKINGLDFSQGLKNIITCSNDETVKFWNLESRELIEA
IKDFNYFDKTTEQIFKPSVVLKTEFPVSRARNIPFGSDMACGIMPLLGGGDAIHIVNYEE
SHQKYLTTGVTQNIDANPAYSFSGHGGPIKDFLWRTRHENYQGFDSKNGWKDFQLVTWSN
KDVDLKLWPHDDALYSSVNYNPSFINFRNDSNSDLADAKQDPVCTAYGYETFCKEPEMTI
ENLAGSKDGDFLSAMALLKLSEGKQRQNEVLSSSHLSWIAGVRIGPSHDRRGTSSSSLFD
EDGPANLGEEVSIVGHKFPFVRFEKISVSTGELVITLKGVVPKEGSLNGAKVDEIEGEND
DEVDRENCGQDQNPSHELSHGKNERRETKEGSDPMVPQVEVTGFSNKGSSQLMGSEQATG
IQSVPDDEANSSKLQNHGIEDDDKYAEVMGGNTEKLVFIRFTVKFPTAYPFLENKTSPSH
SKRRRSRKANTVLFDVEQTHELSFNVKKLIEKNLHKIAEFYTNKYHRFCLEYCLRYLMGE
TIDMDDDLMIENRRDSSGDSVLVEVGNENWVDDLIEQQPNPSGVGGSGGYSSGEDEMATY
DDLIPSHDEFVHNGKNSLSQNLGATMTMKLGTGGETQSSYKFNASRDFDSTPLPKGCGAV
WTPNGQLVCFFTAESELGENNKKSKSGRKDRLGEKYVYRKDATNGDDDDDDDDDDDDDDE
GDEHDGNDDNDKDGENNENDDRSESENDSLDGDKFSEDEIEEDVAQFLNKESSIRNATTE
LVNSRIVPDRNFTKHGMSQVRSLERYTSHGDNSTSFKDDKSKSKNSKYKNKIVILNYGFM
LPNKIELGREYRISGDTPSKLAHFNASITAKHGLSSLTRTWKLLAEILAGVSDSLGNIFE
HRKESRLHPQKYFFDSYVYFWGGHPFGSLGVVSEIFQHYVKLGDIQTLAVMSCLLSASTS
LDHRFIEGQMLSHTIAKGSTNLNTSTYVQTQNMVSPKIGCGFANSNVNTNTNDHSHTFNG
APSYMRGRKLSFNSIHSVTTNTIRSETSFDGNTVGSRRRPLTSNAMLLNSSANNRSINRV
MEPSNKNRLQHQHQYQYQHQRPYSRIEFCDDFRPNPNGFPEFQNITFQFKEEDFSSYRSL
YAETLFNWNLPIHRLELLKFNKSMDKIDGADEYSVHKCSIRKRKKNKQLPTQVFINTVSS
VITSSHNAWNTTKRQTIKYCTYCQLPLEKSMALCVHCEHALHSHCAKDWWSDDVDECPSG
CGCNCLSYSYYS
NT seq
4359 nt
NT seq
+upstream
nt +downstream
nt
atgataggtggggccttgagcaacccgtatgaatctccaacttttggtacggcacttctg
ctacgcattgatggtggtgtaggtgcaatgtcattatcgcctacggggcgtgatgcagtt
cttgctggtcgtaaaggtttgtacgttatcgatcttgatgacccgtttactcctcctcga
tggctacatcatatcacctcttgggaagtggcagatgttcaatggtcacctcacgctttt
caaaaaccatcgtggtgtatctcaacttccaatcagaaagcgcttttgtgggatttgaat
cgaccgtccaccaatgccattgtcaatgttcttcacgcgcataccagggcaattacagat
ataaattttcaccccacgcaccctgagatgttggccacttgctctgttgacaccatgatt
ttcaactgggacatgcgtactccacggaagccagtgtccaagtttgcacactttagggcc
ggaacgattcaagtaaaatacaactgggaaaatgcatatgagttgggtctgactcacgat
aatgagctttggatatgggacactagaaagggtgctttaccgatagctacaattgtggat
gctcatgagggtaaaatcaatggccttgatttttctcagggtctcaaaaatattataact
tgctctaacgacgaaaccgtgaaattttggaatttggaaagtagagaattaatagaagcc
ataaaagatttcaactattttgacaaaactacagagcagatcttcaagccaagcgtggtc
ttgaagactgagtttccggtctcgcgagcgaggaatataccttttggatccgatatggcg
tgtggtattatgcccttattaggtggtggagatgctattcatattgtaaactacgaagaa
tcgcatcaaaagtacttgaccactggtgtaacgcagaatattgatgcaaacccagcgtac
tctttcagtggccatggtggcccgataaaagattttttatggagaacaagacacgaaaat
tatcaaggatttgactccaaaaatggttggaaagattttcaattggtgacttggtccaat
aaagatgtcgatttaaaattatggccacatgatgacgcgctttatagttcggtaaattat
aatccttcgtttattaatttcagaaacgatctgaattcagacttggccgacgccaaacag
gatcccgtgtgtactgcttacggatatgagacgttttgcaaagagccagagatgaccatt
gaaaatttggctgggctgaaagatggagattttctttctgcgatggccttacttaaactt
tccgaaggtaagcagcgtcaaaacgaagtactttcctctagtcacctatcctggattgct
ggagtgaggatcgggccttcgcacgaccgaaggggtacttcctcttcttctttgtttgat
gaggacggcccggccaatttgggtgaggaggtgagtattgtaggacacaagttcccattt
gtgagatttgaaaaaatttccgtctcgacaggtgaattggtgattactttgaaaggagta
gtacctaaggaaggatcattaaatggggctaaggtagacgaaattgaaggagaaaatgat
gacgaagttgatagagaaaattgcggtcaagatcagaatccaagccatgaattaagtcat
ggaaaaaatgaaagacgtgaaacaaaggaaggaagcgacccaatggtcccccaggtcgaa
gttacggggttttcaaataaaggtagttctcaattaatggggagtgaacaagctacagga
atccaaagtgtaccagatgacgaagcaaactctctgaaacttcaaaatcatggaattgaa
gacgatgataagtatgctgaagtgatgggaggaaatactgagaaattagtttttatccgg
tttactgtgaaatttccaacagcatacccgtttttggaaaacaaaacttctccatcacat
agtaaaagacgacgttcccgtaaagcaaatacagttttatttgacgttgagcaaactcat
gaattgagttttaatgtaaagaagttgattgaaaaaaacttacataaaattgcagaattt
tatacaaacaaataccatcgcttttgtttggaatactgcttgagatatttgatgggggaa
acaattgacatggatgatgacttaatgattgaaaacagacgtgatagtagtggcgattct
gtattggtagaggttggaaatgagaattgggtggatgacctaattgagcaacagccaaat
cctagtggtgtgggtggtagtggtggctattcatcgggagaagatgaaatggcgacttat
gacgacctcattccaagccatgacgaattcgtccacaatggaaaaaattctttgtcgcaa
aatttaggtgcaacaatgacaatgaagttaggtactggtggtgaaacacaatcaagctat
aaattcaatgcaagccgggactttgactctacccccttacctaaaggttgcggtgctgtt
tggacacctaatgggcaattggtttgcttctttacagctgaatccgaattgggcgagaat
aataagaagagcaaaagtggtagaaaagatcgtttgggtgagaaatatgtataccgaaaa
gatgctactaatggcgatgatgatgatgatgatgatgatgatgatgatgatgatgatgag
ggagacgaacatgatggtaatgatgataatgataaagatggtgaaaacaatgaaaatgac
gatcggtctgagagcgaaaatgatagtcttgatggagataaattttcggaggacgaaatc
gaagaagatgtagctcaatttttgaacaaagaaagttcgataagaaatgctactaccgaa
ttggtcaactcaagaatagtgcccgatcgaaattttacaaaacatggcatgtctcaagtg
cgctccttagagaggtacacaagtcacggtgataactcaactagtttcaaagatgataaa
tcgaaaagcaagaattcaaaatacaaaaacaaaattgttattctcaactatggttttatg
ttgccgaacaagattgagcttgggagagaatataggatatctggggatactccctcaaaa
cttgcccacttcaatgcttcaattacggctaaacatggtttgagtagcttaacacgcacc
tggaaacttttggcagagatactagctggtgtgtcagattctttaggcaatatattcgaa
catagaaaggaatctcgtttgcatcctcagaagtatttttttgatagttatgtatatttc
tgggggggccatccattcggaagccttggtgttgtgtctgaaatatttcaacattatgtc
aaattaggtgatatacaaacactagctgtgatgtcatgtcttttatccgcgctgacctct
cttgaccatagatttattgaagggcaaatgctatcacatactattgctaaaggcagtacg
aatttaaatacgagcacatatgtgcaaacacaaaatatggtttcgccgaaaatcggttgt
ggcttcgcaaacagtaatgtcaacaccaatacgaatgatcatagtcacacatttaacggg
gccccaagttatatgagaggaaggaagttatccttcaattcaatccactctgtaactaca
aacactattcgttcagaaactagctttgacggtaacaccgttggttcgcggaggaggcca
ttaacttcgaatgcaatgcttctaaattcgctggcgaataatagatctataaatagggtc
atggaaccaagcaacaaaaacaggttgcaacatcaacatcaatatcaatatcagcaccaa
cgaccctactctcgtattgagttttgcgacgattttagacccaacccaaatggttttcca
gagtttcaaaatattacttttcagttcaaagaagaagacttttcatcatacagactgtta
tatgctgagactcttttcaattggaatttacccattcatcgtcttgaacttctcaagttc
aacaaactgatggacaagattgatggagctgatgaatacctggtgcataagtgttcaatc
cgaaagcgcaagaaaaacaagcaacttcctacacaagtatttatcaatacggtatctctg
gttattacgagctcgcacaatgcatggaatactacgaaaagacaaacaattaaatattgc
acctattgccagctaccacttgagaagagtatggcattatgtgtccattgtgaacatgct
cttcattctcattgtgccaaagactggtggtcagatgatgtggatgaatgccctagtggc
tgtggatgtaattgtttaagttactcttactatagctaa
DBGET
integrated database retrieval system