Lodderomyces elongisporus: PVL30_000207
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Entry
PVL30_000207 CDS
T01116
Symbol
DBP2
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVL30_000207 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lel03041
]
PVL30_000207 (DBP2)
03009 Ribosome biogenesis [BR:
lel03009
]
PVL30_000207 (DBP2)
Enzymes [BR:
lel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PVL30_000207 (DBP2)
Spliceosome [BR:
lel03041
]
Complex A
U1 snRNP components
U1 related factors
PVL30_000207 (DBP2)
Complex B
PVL30_000207 (DBP2)
Ribosome biogenesis [BR:
lel03009
]
Eukaryotic type
Pre-60S particles
Helicases
PVL30_000207 (DBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
5234806
NCBI-ProteinID:
XP_001527693
UniProt:
A5DS77
LinkDB
All DBs
Position
1:join(588296..589577,590660..591036)
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AA seq
552 aa
AA seq
DB search
MSYNGGYGQNNGGYGGGQGGYGGRGGAGGYGGGRGGGYGGGGRSGGYGGRGGGGRFQDTR
VELTTPEWDLESLPKFEKNFYNEHPNVTARTDREIEQFRKENEMSILGHDIPHPITSFDE
AGFPDYVLNELKNQGFPKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINA
QPLLKRGDGPIVLVLAPTRELACQIQTECSKFGASSRIRNTCVYGGAPKGPQIRDLANGV
EICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW
SATWPKEVQNLARDYLDNPIQVTIGSLELAASHTITQIVQVVTEYQKRDLLVKHLESALA
DSNSKVLVFASTKRTCDEVTSYLRADGWPALAIHGDKEQHERDWVLKEFRQGSHSIMVAT
DVAARGIDVKGITHVVNYDMPGNIEDYVHRIGRTGRGGATGTAISFFTDNEKKLGGDLCK
IMREAKQTIPPELQAYDRRSYGSHIRYGRGRGGRGGRGGWGGRGGGRGGGRGGGRGGYSS
GSNTAPLGNRRF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacaacggaggatacggacaaaataatggcggctacggtggtggccaaggtggc
tacggcggcagaggtggtgctggcggttatggtggtggtagaggtggtggctacggtggt
ggtggtagaagcggtggatatggtggcagaggtggtggtggaagatttcaagataccaga
gttgaattgactacccctgaatgggatttggaatctttgccaaagtttgagaaaaacttt
tacaacgaacatccaaatgtcactgccagaactgaccgtgagattgaacagtttagaaaa
gagaatgagatgagtattttgggtcatgatatcccacacccaattacatcgtttgacgag
gctggatttccagactatgttttgaatgaattgaagaatcaaggttttcccaaaccaaca
ggtattcaatgtcaaggttggccaatggctttgagtggtagagatatggttggtatcgct
gctactggttcaggtaagactttgtcttattgtttgccaggtattgtgcacatcaatgct
caaccattgttgaagagaggtgatggtccaattgttttggttttggccccaaccagagag
ttggcttgtcaaatccaaaccgaatgtagcaagtttggtgcttcatctaggatcagaaac
acttgtgtttatggtggtgctccaaagggacctcaaattagagatttggccaatggtgtg
gagatttgtattgctactccaggtagattgattgatatgttggaggctggaaaaaccaac
ttgaagagagttacctacttggtgttggatgaggccgacagaatgttggatatgggattt
gaaccacagattagaaagattgttgaccaaattagaccagatcgtcaaactttgatgtgg
tctgctacatggcccaaagaagtgcaaaacttggctagagattacttggataatccaatc
caagtcacaattggttcattagaattggctgcttcacacacaatcacacagattgtgcaa
gttgttaccgaataccagaagagggatttgttggttaagcatttggaaagtgctttggcc
gactcaaactccaaggttttggttttcgcatcgacaaagagaacttgtgatgaagttaca
agttatttaagagccgacggatggcctgcattggctattcatggtgacaaggaacaacac
gagagagactgggtgttgaaagaatttagacaaggttcacactctatcatggtggcaact
gatgttgccgcaagaggaattgatgtcaagggtattacgcacgttgtcaactatgacatg
ccaggtaacattgaggattatgtccacagaattggtagaactggtcgtggtggtgcaact
ggtacagctatttccttttttaccgacaatgagaagaaattgggtggtgacttgtgtaag
attatgagagaagctaaacaaaccattcctcctgaattgcaagcttatgacagaagaagt
tatggtagtcacatcagatatggaagaggtagaggtggtagaggcggaagaggcggttgg
ggtggtagaggtggtggtagaggcggtggtagaggcggtggtagaggtggatactctagt
ggaagcaacactgcgccattgggtaaccgtcgattctaa
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