Lodderomyces elongisporus: PVL30_000261
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Entry
PVL30_000261 CDS
T01116
Symbol
YKU80
Name
(RefSeq) ATP-dependent DNA helicase yku80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lel
Lodderomyces elongisporus
Pathway
lel03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PVL30_000261 (YKU80)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_000261 (YKU80)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
PVL30_000261 (YKU80)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Csm1_B
VWA_2
Motif
Other DBs
NCBI-GeneID:
5234877
NCBI-ProteinID:
XP_001527746
UniProt:
A5DSD0
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Position
1:complement(join(712300..714297,714664..714672))
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AA seq
668 aa
AA seq
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MYRIFSNMSNKEYVTVVLDVSHYMNSKSNGSSTDFETALQLVFKYFIQQLLKNRKSDRYA
FILYAAGRIEFFYENEPLSLSHVKEFYKSAKDVHFDEAKEKLPKNHILEAFDKALLNQIA
NKFRRNVFVVTNASNNKIPQAYINDHANSTASIITKYPIDCTFVFMDNIDSYSIEQYFET
VPSVQNHIHLYKYQQYKKFGPGLKLISPRCLCETYMSFARIGGSESEGINFRIQVYPATK
VQSLIRGHEYIVDPNRLETARVKKETSYYINKSSTITNEIFDFVKDEGHDNAAVDGEYEY
EEGKQNEKKELKYSELCHGFKYSQRNVLALVPELEQEATLATLPGINILGFIDIDKLPIT
YYSDESLYIIPSNKFYSDNRIAFNSFAQSLMNLKSAAIVRYVQKEDDEVQICAVVPQYVN
IEKKQEEKEEDKVKIEVRYGNEDIEEEEEENEEEEKEKTNKTGLVLLMVRLAMKEDEMAG
RFPPLTEMDHTSADSQMEDFIRCKSLDNDQTEPTVIDNMKTGLMAAKTLSPPVSSNSSLE
RMLLSQCPSTKRFNYYIEKLLYQSLDKKLLQEFIKEDGFIEKYLTGDEEHSLFNMNDILN
VGENYFLDERKIEKSNDIANELKKQLDVSFKLNERKSYKKKRKYEEVFGAESIEGNFDQY
FDVDEMLS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaatcttctcgaacatgtcaaacaaggaatatgttaccgttgttttggatgta
tcccactatatgaactccaaatctaacggctcctctacggatttcgaaacagcgttgcaa
ttggtgtttaagtactttattcagcagctattgaaaaacagaaagctggacaggtatgcg
ttcattctatatgccgcaggtaggatagaatttttctatgaaaatgaaccactatcgttg
agccatgtcaaggagttttacaaactggcaaaagatgttcactttgatgaggcaaaggaa
aagttaccaaaaaaccatatattggaggcgttcgacaaagcattgcttaatcaaatagct
aataaatttcgcagaaacgtgtttgtagtcactaatgcaagcaataataagattcctcaa
gcctatatcaacgatcacgcgaattcaactgctagtatcatcactaaatatcccatcgat
tgtacctttgtctttatggataatatcgatagttattcaattgaacaatactttgaaaca
gttcctctggtccaaaatcatatacatctctacaaatatcaacagtataaaaagtttggt
ccgggactcaagttaattagtccacgatgtttgtgcgagacatacatgtcgtttgctaga
atcggcggatcagaaagcgagggaatcaactttcggatacaagtgtatcccgcaacaaag
gtacaaagtttaataagggggcacgagtacattgtagatcctaataggttggaaacagct
agggtgaaaaaagaaacatcttactacataaacaaaagctcgacaatcaccaacgagatc
tttgattttgttaaagatgagggtcacgataatgccgctgttgatggtgagtatgaatac
gaagaaggaaagcaaaacgagaaaaaagaattaaaatattctgaattgtgtcatgggttc
aagtattcgcaaagaaatgtgcttgccctagtaccggagctagagcaagaagcaactctt
gcgactcttcctggtataaacatattggggtttattgatattgataaattgcccataact
tactactccgatgagtctttgtacattattcctagcaacaaattctacagcgataataga
attgcatttaattcatttgcccagtccttgatgaatctcaagtctgcagcaattgtgagg
tacgtacaaaaagaagatgacgaagttcagatttgtgcagttgtgcctcagtatgtcaac
attgagaagaaacaagaggagaaagaagaggataaagtgaaaatagaagtgaggtacgga
aatgaggatatagaagaagaagaagaagaaaacgaagaagaagaaaaagagaagacgaat
aaaactggccttgttttgttaatggtgagactagctatgaaagaagatgaaatggcgggc
cggttcccgccattgacagagatggatcatacactggcggactctcaaatggaggacttt
atacgatgcaaaagtttagacaatgatcaaacagagcccactgtgatagacaacatgaaa
acaggattgatggcggcaaagacacttagccctcctgtaagtagtaattcgtcattagaa
agaatgcttttgtctcaatgtccttccactaaacgtttcaattattacatagaaaagcta
ttgtatcagtccttggacaaaaaattattgcaagaatttatcaaggaagacggatttatt
gagaagtatcttaccggcgatgaagaacattcattgttcaacatgaatgatattctcaat
gttggggaaaattatttcctcgatgagaggaagatcgaaaaatctaatgacattgcaaat
gaattaaagaaacaattggatgtgagctttaaactcaatgaaaggaaactgtacaaaaag
aagagaaagtacgaagaagtttttggtgctgagagcattgaagggaatttcgaccaatac
tttgatgtcgacgagatgttaagttaa
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