Lodderomyces elongisporus: PVL30_000284
Help
Entry
PVL30_000284 CDS
T01116
Symbol
SMC1
Name
(RefSeq) Structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
lel
Lodderomyces elongisporus
Pathway
lel04111
Cell cycle - yeast
lel04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PVL30_000284 (SMC1)
04113 Meiosis - yeast
PVL30_000284 (SMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_000284 (SMC1)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
PVL30_000284 (SMC1)
Meiosis-specific proteins
Cohesin complex and associated proteins
PVL30_000284 (SMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_23
AAA_15
ABC_tran
OVT1
MmeI_TRD
AAA_27
DUF5798
Motif
Other DBs
NCBI-GeneID:
5235748
NCBI-ProteinID:
XP_001527771
UniProt:
A5DSF5
LinkDB
All DBs
Position
1:complement(775794..779642)
Genome browser
AA seq
1282 aa
AA seq
DB search
MGRLIGLELENFKSYKGRTVIGLGSSNFTSIIGPNGSGKSNLMDAISFALGLSSSQLRSQ
SMRDLIYRGRRNNKHVSSGINESNNNKDNNKDNDKDNDGGFGVENDDTTNRQILEADPTT
AYVMAIYEKDDGDILKFKRSISTNGSTDYRINGKSVTRLSYTSTLQQENILIKARNFLVF
QGDVEQIASQSPKHLTTMIEEISGSGEYVQEYEQCKEEWEKAREVSNNVFSRKRTLNTES
KQYKEQAIEQRQFESNIILRNDLIKKIHLYKLYHNEKKRKDLQKKMDVKNEELKNAKLER
SKLESSLKALAASQSKSVLELKHQKSEIERCSASIDSGKRDLIPVDTSIDSLVNKIELSK
RKIADLEEDLDSQKERVRNAKRQLAESRKLFDAFEESATKASNAQASINITSEGRLEYEQ
LRSEYLASGGSSLEEQIAIYTSEKDTIQANQKSLESKKATANDRVLELHSNLRSDLKPRL
ADLESELSKIINEKTQKSLLRDDLIAKKDAHNQDLLQINTRLRDTLLKLEESSFKQRESN
RQKQLHENVATLKKMMPGTSVRGIVHELLRPSQQKYDLALSTILGKNGDAIIVESSAIAF
RCVEILKERRSGVATFIPLDSIENDSININYLRTMYKDAVPGVDVIEYDDKSLEPAIKYI
VGDTLITSDISTARALRWNNNNNNNNSSQSFRGKIVTLSGSIIHKSGQMTGGDQGQKSSA
SLSWDKQEWKRLNEQKDFYLNQLAKLSESQPKEMELNLLTEEINSLDDKIPLLKNQKSSL
ERLIKDRETEVEFHAKNLTDIQEEIDRELDKVNHIDIATSRVNEQVQTLKNTVFAEFCNK
YGLLNGIKEYEELHGSRMRIRAKERLQFTKAISALENKESFEEAKCEEIEKRKSILQNQL
VDHEADLSSLREQKAAMEESLDKFEAELQVLNEEKQRLQSTLNSQSKSVKSIESDVSELS
VEISTMAKSSISIEENILKVDTERANTLRNCKLQNIILPLLRGTLDSLSVQLEQQDVKSF
VYDVEVDYEMLDDKYKAACNIRLEMELETLLQNTIEVLEQLTPNSKAMERFKDVEAKLRS
YDTEYSAARQSERRAFEKFKNVKDKRYEKFMSAFNHISSRIDSIYKELTKSRMFEIGGSA
YLMLEDEEEPYLFGIKYHAVPPMKRLEDMELLSGGEKTIAALALLFAIHSFQPAPFFVLD
EVDAALDNSNVARIGNFIKNHAGSALQFIVISLKSNLYEKSDALVGVYREQGENTSKTVT
LDLGEYQDEEVSLRPNPITATS
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgggtagactaataggtttggagcttgagaatttcaaatcgtataaaggccgaactgtt
atcggtctaggctcgtcaaattttacatcaatcattggaccaaatggttcaggaaagtcc
aatctcatggatgcaatttcctttgctttgggcctcagctcgtctcaattacgatcacaa
tcaatgcgcgacttgatataccgagggcgcagaaataataagcatgtttctagtggtata
aatgaaagtaataacaacaaggacaacaacaaggacaacgacaaggacaacgacggtggt
tttggggtggaaaacgatgatactactaaccgtcagattcttgaagccgaccctaccaca
gcatatgttatggcgatatatgagaaagatgatggcgacatattaaagtttaaaagatcg
atatcgactaatggctcaacagattaccgtatcaatggtaaatcggtcacaagactcagt
tacacactgaccttgcagcaagaaaacatcttgatcaaagcacgcaattttttggttttc
caaggagatgtggaacaaattgcatcacaatctcccaaacatctcaccaccatgattgaa
gaaatcagtggttccggtgaatatgtgcaagaatatgaacaatgcaaagaggagtgggag
aaagctagagaagtttcaaataacgtattttcacgcaagagaactttaaacacggagtca
aaacagtataaagaacaagctattgagcaacgccagtttgagtccaatataatacttcga
aacgaccttattaaaaaaattcacttgtacaaactttatcataatgagaagaaacgcaaa
gatttgcaaaaaaagatggatgtgaaaaatgaagagttgaagaatgccaaattggaaaga
tccaaactcgagagttcattaaaagcattagccgcgagtcagtccaaatcagtcttggaa
ctcaaacatcagaaatcagaaatcgaaagatgcctggccagcattgattctggtaaacga
gacttgattccagttgacacgagcatcgactctttggtaaataaaattgaactactgaaa
cgaaaaattgccgatcttgaagaggacttggattctcaaaaagaacgcgtgcgcaatgcc
aaacgtcaacttgcagaatccagaaaattgtttgatgcgtttgaagagtcagccacaaaa
gcttctaatgctcaagcgtcaatcaacattacgtctgagggccgcttagaatacgagcaa
ttgcgctccgagtacttggcatccggagggtcttctttggaggaacaaattgcaatttac
acaagtgaaaaggataccatacaagccaatcagaagagcctcgaatctaaaaaggcaaca
gcaaatgatcgtgttttggagctacattccaaccttcgatcggatttgaaaccgcgacta
gccgatttggagagtgagctttccaagattattaatgaaaaaacgcaaaaatctttactc
cgcgatgacttgatagccaagaaggatgcacacaaccaagatttgctacaaatcaatact
agattaagagacacattactcaaattagaagaactgtcatttaagcaacgggagtccaat
agacaaaaacagttgcatgaaaatgtggctacgttaaaaaaaatgatgccgggcacttct
gtgcgtggtattgtgcatgaattattgcgtccttctcagcaaaaatacgaccttgcatta
ctgacaatccttggcaagaatggtgatgcaataattgtcgagagctctgctattgctttc
aggtgtgttgagattcttaaagaaaggcgttcgggagtagcaacatttattcctttagat
tctattgaaaatgattccataaacatcaattatttgcgaactatgtataaggacgccgtg
cccggtgtcgatgtgatcgaatatgatgataagtctttagagccagcaatcaaatatatt
gttggtgatacattaattacctcggacatcagcacagcacgagcattgaggtggaacaac
aacaacaacaacaacaacagcagtcaaagcttccgaggtaagattgtgacattgctggga
tcaattatccacaagtctggtcagatgacaggtggtgatcaaggacaaaagtcgtcagcc
agtttgagttgggacaagcaagaatggaagcgattaaatgagcaaaaggatttttatttg
aaccaactcgcaaaattgctggaactgcaacccaaggagatggagttgaatttgttaaca
gaggaaatcaatctgcttgatgataagataccgttgctcaaaaatcagaaatcaagtttg
gaaagactcattaaggatagggaaaccgaggttgagtttcatgctaagaaccttaccgat
attcaagaagaaattgatcgcgaattggataaggtgaatcacattgatatagccacctct
agagtgaatgagcaggtgcaaactttaaagaatacagtgtttgctgaattttgcaacaag
tatgggcttttgaatggtattaaagagtatgaagaactccacggttcacggatgaggatc
cgtgctaaagaaagattacaattcacaaaggcaatttcagcattggaaaacaaggagtcc
tttgaggaggcaaaatgtgaagaaatcgaaaagaggaaatcaatacttcaaaatcaattg
gtagaccatgaggctgatttgagttctttacgagaacaaaaagctgccatggaggaactg
cttgataaatttgaagctgaattgcaggtgcttaatgaagaaaaacaaaggcttcagtct
actctaaattctcaatccaaatcagtcaagtccatagaatcggatgtgtctgaactatca
gttgaaatttcaacaatggctaagctgagcattctgattgaagagaatattctcaaggtt
gatacagagcgtgcaaacacattgaggaattgtaaattgcaaaatataattttaccttta
cttcgaggaacacttgactcactttctgttcaattggagcaacaagatgtcaagtctttt
gtttacgatgtcgaggttgattatgaaatgcttgatgacaaatacaaggctgcttgcaac
atcaggttggaaatggaattagagacattgttgcaaaacaccattgaggtattggaacaa
ttgacaccaaatagcaaagcgatggaaagattcaaggatgtagaagcaaaacttagatca
tatgacactgagtacagtgctgctcgtcaaagcgaaaggcgggcgtttgagaaattcaaa
aacgtcaaggataagaggtacgaaaagtttatgagtgctttcaatcacatctcaagtcgc
attgattctatctataaagagcttaccaaatcacgtatgtttgagattggaggatcggct
tatttaatgcttgaagatgaggaggagccttacttgtttggcatcaaataccatgcagtg
ccacccatgaaaagattggaagatatggagttactttcaggaggtgaaaagactattgca
gcattggcattgctttttgctattcattccttccaaccagctcccttttttgttttagac
gaagtggatgctgctttggacaacagtaacgtggcgcgcataggcaatttcataaagaac
catgcaggctcagcactccagtttattgtgatttctctcaagagcaatctttatgaaaaa
tccgatgccttggttggtgtataccgagagcaaggcgaaaatacatcgaaaacagtaact
cttgatcttggtgagtaccaagacgaggaagtgtcgctcagacccaatcctattactgcc
acttcgtag
DBGET
integrated database retrieval system
