Lodderomyces elongisporus: PVL30_000296
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Entry
PVL30_000296 CDS
T01116
Symbol
REX3
Name
(RefSeq) RNA exonuclease 3
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVL30_000296 (REX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lel03009
]
PVL30_000296 (REX3)
Ribosome biogenesis [BR:
lel03009
]
Eukaryotic type
Pre-60S particles
RNases
PVL30_000296 (REX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
5235035
NCBI-ProteinID:
XP_001527785
UniProt:
A5DSG9
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All DBs
Position
1:complement(821188..822564)
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AA seq
458 aa
AA seq
DB search
MLSKLKNIDGKPILSKKSNNENINRKRSIDSDDDNEDEVEVRIKKSTEKKARQRVPEDES
KKNHNGDGKRENHRREKRARLDSTLNQDVKLILPKPVNTNPASIPERKKFIERIAQILVK
KNPDLKQPKAQAIEIEFEIAQKSTFRTYASTLRNAVYKLQHPEKFEKNNDAQLKTKEEEL
RILRSMVIPVTKLEKYGFVMKIPPKEVNESLTRECRRCGTVFKLDQQLEPTTCIFHHGKL
RRQPGTKIKFYDCCRAPEDDNKPCDESKHHVFQISKPEEKQAVLPYTLTKEIFQDKAQYN
VLGIDCEMGFTTKGFELMRITAVDYFTEKTVLDTYVLPYGEVVDLNTRYSGISQINADFV
SYNQALQELGAIMDKDTILIGHGLENDMNAMRLIHEQIIDTSILYPKFETSPTFRWSLKD
LTFKYLSKNIQIGEHDSAEDSVAAIQIVKYHVKKGNSP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaaaattgaaaaatatcgatggtaaacccattctttcaaaaaaatctaacaat
gaaaatataaacagaaaacggtcgatagatagtgatgatgacaatgaagatgaagttgaa
gtgagaattaaaaaaagcaccgaaaaaaaagctaggcaaagagttccagaagatgaaagt
aaaaaaaatcataatggtgatggaaagagagaaaaccaccgcagggagaaacgagcaagg
ttagattccacattaaatcaagatgttaaactcattctccccaaaccagtaaatacaaac
cctgccagtataccggagcggaaaaaatttatcgaacgaatagctcaaattcttgtcaag
aagaacccagacttgaagcaaccaaaagcccaggcgattgagattgaatttgaaattgcc
caaaaatcaacattccggacatatgcttcaactctccgaaatgctgtgtataagcttcaa
catccagagaagtttgaaaaaaataatgatgcgcaactaaagacaaaggaagaagagcta
cgaatattgcgatcgatggttattccagtaacaaaattagagaaatatggatttgtcatg
aaaatacctccaaaggaagtaaacgaatcattgaccagagaatgccgtcgatgtggtaca
gtatttaaacttgatcaacaattggaacccactacttgtattttccatcatggaaaatta
cggcgccaaccaggtactaaaataaagttttatgattgttgtcgagcacctgaagatgat
aacaaaccgtgcgatgagtccaaacaccatgttttccaaatctcaaaaccagaggaaaaa
caggctgtattaccgtacacgttaaccaaggaaatatttcaagataaagctcaatataat
gtgctaggtattgattgcgagatggggttcacgacaaaaggctttgagctaatgcgaatt
accgcagtggactatttcactgaaaagacagtattagatacatatgtgcttccttatggc
gaggttgttgatctcaatactaggtattctggtatttcacaaatcaatgcagattttgtc
agttacaaccaagcattacaagaattaggcgcaataatggataaagatacgatcttgatc
ggacacgggttggaaaacgacatgaatgccatgagattgatccatgaacaaattatcgat
acatcgatattgtatccgaaatttgaaaccagtcctacatttagatggagtttaaaggat
ttaacatttaagtatttgagtaaaaatatacaaataggagaacacgatagtgcagaggat
tcggtcgcggcaatacaaattgtcaagtatcatgtgaagaagggaaactcaccctaa
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