Lodderomyces elongisporus: PVL30_000657
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Entry
PVL30_000657 CDS
T01116
Symbol
RIM20
Name
(RefSeq) pH-response regulator protein PalA/rim20
KO
K12200
programmed cell death 6-interacting protein
Organism
lel
Lodderomyces elongisporus
Pathway
lel03250
Viral life cycle - HIV-1
lel03272
Virion - Hepatitis viruses
lel04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PVL30_000657 (RIM20)
03272 Virion - Hepatitis viruses
PVL30_000657 (RIM20)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PVL30_000657 (RIM20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_000657 (RIM20)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lel04147
]
PVL30_000657 (RIM20)
Membrane trafficking [BR:
lel04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
PVL30_000657 (RIM20)
Exosome [BR:
lel04147
]
Exosomal proteins
Proteins found in most exosomes
PVL30_000657 (RIM20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
5235897
NCBI-ProteinID:
XP_001528162
UniProt:
A5DTJ6
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All DBs
Position
1:1836776..1839271
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AA seq
831 aa
AA seq
DB search
MATNNLLNVPLRHTSSIDLGQELSLAITEKFFQPPSLFDKDLNYLTTLRNEIQTISNSKG
AELHSSSSSSSSSSSSSSSSLTQLESHLNKLFTYFASLESISKKFPQDSVLFSWTPTIYK
QNSTPINVASFKFEQLNVIFQIACVYSIMGWAQSRHSDEGLKKSCQYFQHAAGAFNFLNE
QVQRVTAMNLKDRPFEPQEDWDNNTISCLVYLMLAQAQEAIWQKAIHGETTKDSIIARLA
VQTSELYADALNYSQTSRYINLEWQNHITVKKYHFLAAAHLRTSNVALDNFQYGEQVAHL
RVAQDAVKVAVKHKKYVNSFVIEDLTGLQEIVDAKLRVAEKDNDLIYLKIVPPENELKHI
AGALMVKPISPSEKFQLGKTQAPVLFDELLPYVIIHYAQALRERQDDYVRGKIFEPIQGL
NHMMTKFLNEKNLPASIDALEQPENIPDSIVHHSRDIMDHGGVNSIENELLNLSGLRKEC
LHLIQECQLRVDMDRQEDSLLRQGHEKEQEQEQEQEQEQKPGDLSHYQRQTTDVAARVLI
EKIHKMREYLDLAVHGDIQVEQKFNSIKDTLAVLMGGYASLHKFIPNSNYVKLDKNVANV
VAELRTALNDWDSIESSRSQFLQDVEIKNRDNNILPKLIQEYKQRKEDALYDNQGQFQTN
AFELVYESHFKMLDSDISYIQQTKLEQQQLESRIDTINTQFIQLYTSTVNSTQQKRQMAM
QQLDSAYVMYTEIKVNLNEGLKFYHDFITRGNNVLRDAEEYLRNRRMESRELEMEMKLKM
TKKRQQVGNNNLQIPVRGQSDTATSREQPKLVSPRGQKSNVWDPNSGIKFG
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaataaccttctaaatgttccattgaggcatacttccctgatagatttgggt
caagagctcagtttagccattaccgaaaagttttttcaaccaccatcactctttgataaa
gaccttaattatttaacaaccctccgtaatgagattcaaacgataagcaatagcaaagga
gctgagttgcattcttcttcttcttcttcttcttcctcatcatcatcatcatcatcatca
ttgacacaattagagtctcatttgaataaactatttacatactttgcttcgcttgagtct
attagcaaaaaattccctcaagactccgtactattttcttggacccctacaatttacaaa
caaaactctactccaataaatgttgctctgttcaagtttgagcaactcaatgtcattttt
caaatagcatgtgtttactctataatgggatgggcccaatcacgccactcagatgaaggg
ttgaagaaatcgtgccagtatttccagcatgcagcaggtgcctttaactttcttaacgag
caagtccaacgtgttacagccatgaatttaaaggatcgtccttttgagccacaagaagat
tgggataacaatacgatcctgtgtttggtatatcttatgcttgctcaggcgcaagaggct
atttggcaaaaggctattcatggagagacgactaaggactcgatcattgcaagattagct
gttcagacttcagaactttatgcagacgcgttaaactattcgcaaacgtcaagatacatc
aacttggaatggcaaaatcatataactgttaaaaagtaccactttctagccgctgcccat
ttgcgaactagtaatgtggcgcttgacaattttcaatatggagagcaggtggcacatttg
agagtagctcaagacgcagtgaaagttgctgtgaagcacaaaaaatatgtaaacagtttt
gttattgaagatctcacggggttgcaagaaatagttgatgcaaaactacgtgtggctgaa
aaggataacgatttgatttatttaaagattgttccacctgaaaacgaattgaaacatatt
gcaggtgcattgatggtgaaaccaattagtccatcggaaaagtttcaactcggaaagaca
caagcgccagtattgtttgatgagttattaccgtatgtaatcatacattatgcacaagct
ttgagagaaaggcaggatgattatgtacgaggaaaaatatttgagcctatacaagggtta
aatcacatgatgaccaaatttttgaatgaaaaaaatcttcctgcaagcattgatgcgtta
gaacaacctgaaaatattccagactctatagtgcatcattctagagatataatggatcat
ggaggcgttaactctattgagaacgagcttctcaatttaagcggcttaagaaaagaatgt
ttgcaccttattcaagaatgtcaattgcgagtcgatatggataggcaagaagacctgttg
ttgagacaaggacacgaaaaggaacaggaacaggaacaggaacaggaacaggaacaaaaa
cccggcgacttatcccattatcaaagacaaaccacagatgtagctgctcgtgtacttatt
gaaaaaattcacaaaatgagagagtaccttgatctagctgttcacggcgatatacaagtg
gaacaaaaattcaatagtattaaggacactttggcggtacttatgggtggatatgcgtcg
cttcacaaatttataccaaactcaaactatgttaaattggacaagaatgttgctaatgtg
gtggcggagcttagaactgcattgaatgactgggactctattgagtcgagccgatcccag
tttctacaggatgttgaaattaaaaacagagataacaacattttgcccaaacttattcaa
gaatacaagcaacgcaaggaagatgctttatatgacaatcagggacaatttcaaacgaat
gctttcgaacttgtttacgaatcccactttaaaatgcttgacctggatatttcgtatatt
cagcagaccaaattagaacaacaacaacttgaatcaaggattgatactatcaatactcaa
tttattcaactttatacctctactgtcaactccactcagcagaaaagacaaatggcaatg
caacagttggactcggcatatgtaatgtacactgaaatcaaggtcaacttaaatgaaggc
ttgaaattctaccatgattttatcacaagaggaaataacgtgcttcgtgatgctgaagaa
tatttaagaaatcggagaatggaaagtagagagttggagatggagatgaaattgaagatg
actaaaaaacgtcaacaagtaggaaataataatttacaaatcccagtaaggggccaaagt
gacactgcgactagccgagagcaaccaaagttagtttctcctagaggacaaaagtccaat
gtttgggatccaaactctggtatcaagtttggataa
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