Lodderomyces elongisporus: PVL30_000729
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Entry
PVL30_000729 CDS
T01116
Symbol
VAM6
Name
(RefSeq) Vacuolar morphogenesis protein 6
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
lel
Lodderomyces elongisporus
Pathway
lel04138
Autophagy - yeast
lel04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PVL30_000729 (VAM6)
04148 Efferocytosis
PVL30_000729 (VAM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_000729 (VAM6)
Membrane trafficking [BR:
lel04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
PVL30_000729 (VAM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
WD40_like
Flu_PB2_6th
Motif
Other DBs
NCBI-GeneID:
5235187
NCBI-ProteinID:
XP_060975166
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All DBs
Position
1:join(2031803..2031808,2031824..2035120)
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AA seq
1100 aa
AA seq
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MNPFIRVKLPLQGSSNRISSINETGDYLYVGTNKGDLYIYCSAPTPNTTLASIHHSSHSL
KHSDRASTLKSKSIQETTNASSASRSIRSFRSYQDAKHLFTENSRYHLQHTFTNLTQDGS
SISTIKILPPNLCESRGNMSKQMVMIISPTSLKLYELVGNHSNLLYSLDEPRITDALYIN
GDENGNHTTDRKENQERLLLISLKRKVFVVHITNKSRNVLRFNMLREISLKGRVQSLTKF
NDDSVIVGTDTEYVTFSFDDFHVSPLAASQKADVFSQGAPFKYFGLSASGPSSWILDTGY
GTLLLIRDTTVVALDKRCEEKLTILPIKLSVVPLAAIYIRPMYVAFVYQKRVEIYDLHLG
ILVQKFTHYLNSQYISASVEGDIFNLACGLDVLQFNISPPSKQILQFLNISGRVPGSNTG
VNVSGNDNFNSTANFRHPQSDLKAVGIELAIQMVTSLESNDNNELFSSEKTKLLKLRELY
KLKSIYLFDSYARYNEALVDIASEWMVSYHDVLQLFPDFLNAEILLSLSQSESLGGETHD
ADHDNKSMVPMIGTIKKVTKDDLETVNLSESEYETDTTRRTLPMASKKSRSSKSQGVRRF
IKAVNNLIIYLTEQRRILALFMDKGSIKWKNVLLEPDDIYPLIDDQLEYVATIIDTSLFL
CYFYTKPMLLGPLLRLPNNRCDSKIVNECLLSSLHNHVQQRNMMQPNYVAELLDFYFGRQ
LHEEALDMLKKLALENEDAVAIEKDANDNNPVHVHASKDDNYYNNYVTGPQLTVRYLQRL
TNKHLSLIFEYASWVIDADESNSRSLFMNDSYECESLDNMAVLQFFVKRKDFDLAIEYLE
WLLFKSDLVAKLKLEKLFVDFETKLCLLYLKQIKAHSLHEEEYYESLWRLLSTSETFDPW
PILREIPTTEDKFLRLTVFVYKKLHEHENAVDVLYGQLNNLDEAIEYCSSIYRQPQGKQI
GQNLFHKLLEDLLMNYSRNKNVDQIAKLLLGKGSQMSVERVFKVLPPSFPLFEIAPYLRL
QVQRFQNDADDTRVNSQLYKVGSINLKHQVLQLQDQCFKINSSKTVCPVCKEKLGYSILT
VTDNKDIIHYGCSQRLRQTS
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttcattagggtaaagttgccattacaagggagcagcaaccgaatatcgtca
atcaatgaaactggcgactatttgtacgttggcaccaacaaaggtgacctttacatttat
tgctcagcaccaacgccaaacacaacacttgcatcgatacatcattcgctgcacctgttg
aaacatagcgatcgtgcactgacactcaaaagtaaaagcatacaggaaacaacaaatgcg
tctctggcgtctagatcaatccgttctttccgttcttaccaggatgcaaaacatttattt
acagagaatagtcgatatcatttgcaacacacttttacaaacttaacacaagatgggtcg
agcatttcgactatcaaaatattaccacctaatctatgtgaaagtcgtggcaacatgagt
aaacaaatggtaatgatcatcagtccgacgtcgcttaagttatatgaattagtaggaaac
cactcaaatttgctttactcactcgacgagcctcgtattactgatgcgctatacattaat
ggggatgagaatggaaatcatactacagatagaaaggaaaatcaagaacgattgttactt
ataagcttgaaacgaaaagtttttgttgttcacattaccaacaagtcgcgaaacgtgctt
cgattcaatatgttgagagaaattctgctcaaaggtagagtacaatcgttaacgaaattt
aacgatgatagtgttattgttggtacagatacagaatatgtcacattcagctttgatgac
ttccacgtatctccactagctgcaagccaaaaggcagatgtatttagtcaaggcgcccca
ttcaaatattttggattatcagcatcaggtccgctgctgtggattcttgatactggttat
ggaacgttattacttattagagatactacagttgttgctttggataagcgctgtgaagaa
aaactcacgattttaccaataaagttgtccgttgttcctcttgcggccatttatattcgc
cccatgtatgtggcttttgtctaccagaaaagggttgaaatttatgatttgcatttgggt
atattggtccaaaagttcacacattatttgaattcacaatacatatctgccctggttgaa
ggtgatatttttaatttggcttgtggtttagatgttttgcaatttaacatttcccctccg
ctgaagcagattttgcaattcttaaacatatcagggagagtccctggtagtaatactggc
gttaatgtttctggaaacgacaatttcaacagcactgccaattttcgccaccctcaaagc
gatttaaaagcggttggtattgaattggcaatacagatggttacactgttggaatcaaat
gacaataatgaattgttttccagtgaaaagactaaattgttgaaacttcgagagttatac
aaacttaaaagtatctacctattcgatctgtatgcacgttacaacgaagccttggttgat
atagcatctgagtggatggtgtcgtatcatgatgtattacagctattcccagattttttg
aatgcagagatacttttactgttgctgcaatcagagagtttagggggagaaactcatgac
gctgatcatgacaataagagcatggttccaatgattgggacgattaaaaaggtcaccaag
gacgaccttgaaacggttaatctttccgagtccgaatatgaaactgatactacgcgccga
acgttgcccatggcatctaaaaagtcaagactgtccaagtcgcaaggtgtgcgacgtttc
atcaaagctgttaataacctcatcatatatctcacagagcaacgtcgtatccttgcactt
tttatggataaaggttccatcaaatggaaaaatgtgcttcttgaaccagacgacatatat
ccgctaatagatgatcaattggaatatgttgccactattatagatacatcattgttttta
tgttatttttataccaaaccaatgttgcttggaccactattgagacttcctaataaccgt
tgtgattccaaaattgttaatgaatgcttgttgagcagtcttcataatcacgtccagcaa
agaaatatgatgcagccaaactatgtagcggagcttttggatttctattttgggagacaa
ctacacgaagaagcacttgatatgttgaaaaagttagctttagaaaatgaagatgcagtt
gctattgaaaaagatgcgaatgataataaccctgtgcatgttcatgctagcaaagatgat
aactattataataattatgtaactggtccacaactcacggttcggtatttgcaaaggctt
acaaacaaacacttgtctttgatatttgaatatgcgctgtgggttattgacgctgacgag
agcaacagccggctgttgtttatgaatgattcatatgagtgcgaaagtcttgataacatg
gcagttttgcaattttttgtcaagcggaaagattttgacttggctatcgagtaccttgaa
tggcttttgttcaagagtgatttggtggcaaagttgaaattggagaaattgtttgttgat
tttgaaacaaagctttgtttattgtatttgaaacaaataaaagcacattcgctacatgag
gaagaatactacgagagtctttggcgcttactctccacgagtgagacatttgacccgtgg
cccattttacgagagattccaactacagaggacaagtttcttagattgactgtgtttgtt
tataaaaaactacacgagcatgagaatgctgttgatgtgctttatggtcaattgaataat
ttggatgaggcaatcgaatactgttcgctgatttatcgccagccgcagggtaaacagatt
ggtcagaaccttttccataagttgttggaagatcttttgatgaactattcaaggaataaa
aatgttgatcaaattgcgaaactattacttggaaaaggtctgcaaatgtctgtagaacgt
gtctttaaagtacttccgccatcatttcccttgtttgaaattgctccgtatttaaggttg
caggtgcaaagatttcaaaacgatgctgatgatacacgagtcaattctcagctctataaa
gttggctcaatcaatctcaagcatcaagtcttgcagctacaagatcaatgttttaaaatt
aattcaagcaaaacagtttgtcctgtttgtaaagaaaaattaggatacagtattttgaca
gtaaccgataacaaggatattatacattatggttgttcccagcgattacgacaaaccagt
taa
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