Lodderomyces elongisporus: PVL30_000871
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Entry
PVL30_000871 CDS
T01116
Symbol
NEP1
Name
(RefSeq) 18S rRNA pseudouridine methyltransferase
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVL30_000871 (NEP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lel03009
]
PVL30_000871 (NEP1)
Enzymes [BR:
lel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
PVL30_000871 (NEP1)
Ribosome biogenesis [BR:
lel03009
]
Eukaryotic type
90S particles
Other 90S particles
PVL30_000871 (NEP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
5234709
NCBI-ProteinID:
XP_001528383
UniProt:
A5DU67
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Position
1:complement(2435250..2436104)
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AA seq
284 aa
AA seq
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MTESNVKNSKKEEVSNSTATAQSEEKATKNSAPQSNKTIPPSSSSSTSVPPASLIPVQPT
PLTSRDKTTQRLIVVLSQACLETYKMNTSGGPGGDRYALLNCDDHQGLLRKMGRDIAEAR
PDITHQCLLTLLDSPINKAGKLQVYIQTARGVLIEVNPSVRIPRTFKRFSGLMVQLLHKL
NIRSENSKEVLLKVIKNPITDHLPTKCRKVTLSFDAKLRKVQDYVTTLDEDESICVFVGA
MARGKDNFADEYVDEKIGLSDYPLSASVACSKFCHGCEDVWGIY
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatctaacgttaagaattccaagaaagaagaggtgctgaatagtacagccact
gcacaatctgaagagaaggctactaaaaactcagctccacaatctaacaaaacaatacca
ccatcatcatcatcatccacctcggtgcctccagcttcactcattcccgtacaacctaca
ccactcacgtctagagacaagacaacgcagagattgattgttgtgctttcacaagcatgt
ttggaaacatacaaaatgaatacaagtggaggaccagggggtgataggtatgcattatta
aattgtgatgatcaccaaggattattgaggaagatgggcagagacattgccgaagcccgt
ccagatatcacacatcaatgtttattgaccttattggactctccaatcaataaggctgga
aaattacaagtgtacattcaaacagcgagaggtgtattaattgaggttaatcccagtgtg
aggattccaagaacgtttaagagattttcaggtttaatggttcaattgttacacaagttg
aacatcaggtcagagaattccaaggaagtgttgttgaaggtgatcaagaatccaataaca
gaccacctacctaccaaatgtagaaaggtcactttgtcattcgatgcaaaactcagaaaa
gttcaagattacgtgacgacattagacgaggatgaaagtatttgtgtttttgttggtgct
atggctagaggtaaggataactttgctgacgaatacgttgatgagaagatcggtttatcg
gattatccattgtcagcatctgttgcttgttccaagttctgtcacggatgtgaagacgtt
tggggtatctactaa
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