Lodderomyces elongisporus: PVL30_001000
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Entry
PVL30_001000 CDS
T01116
Symbol
VPS36
Name
(RefSeq) Vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lel
Lodderomyces elongisporus
Pathway
lel04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PVL30_001000 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_001000 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lel04147
]
PVL30_001000 (VPS36)
Membrane trafficking [BR:
lel04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
PVL30_001000 (VPS36)
Exosome [BR:
lel04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PVL30_001000 (VPS36)
Exosomal proteins of colorectal cancer cells
PVL30_001000 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Vps36-NZF-N
DZR
PH-GRAM_MTMR6-like
bPH_3
Adaptin_binding
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
5235413
NCBI-ProteinID:
XP_001528513
UniProt:
A5DUJ7
LinkDB
All DBs
Position
1:2782379..2784427
Genome browser
AA seq
682 aa
AA seq
DB search
MTWLKLWRPIKINRSNRPILDDLEHSVYVKDNVGLYQGKAKITNHQNGRLYLTNKRIIYF
DNDDCKNQSAAVDIRHLTSAELIDGFLRSSPKVKLFIKTVENDDHGNGSVFNEPNNVTWV
CKICSFNNVIEGAFNLNLDEMPKCIACGVHPSRAHLENALENARSRPTPTPSPVPNLDST
SDASGYSSSTPSHNGHEVLQPSSQRPTSLVTSTSPGVCPVCTFHNHKSIKFCEMCGAEVN
SMNNVSNSVTPEIDNNPLSLQLESPEQYTNGQPYIKISFRKGGEKEFFQRVANIIDEIKW
ENLKKKGGINQDAKKIESTQSPTSKKNGSGARARARVGVGAGAGLSALEQIGEQQRKKNE
LILSTSLDDLEQLMFKFKDLMNISSSLSHLAFGQRKTVLSPLNVSRSSKIYHQELSRHIS
EYLTSYKLTKSTAMITLQDLFADYNRDLVKSSGYACELIDASDFKKSIDLFQSLNLPVVQ
DRYENSDLVVVKPKIHADTYGEFIVKFLQNHEQNCKEIDLRRELIDDEITNEGMVFEEGC
YGSSVTQISHAFNWSYNITLEELDKSVKSGEIVIDQSISGTFYYVNKFRFSQADWHNDEK
EMVVIKNSIVDEQKKITMDLKRDFKSQRQHDLISLQPNYEFGAVADDGGLSEEFAETPPV
NDIPLQQQLSSIHLNDLQGLKF
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacctggctaaagttatggaggccgatcaaaataaacagaagcaatcgtcctatttta
gatgacttggagcatagcgtatatgtgaaagataatgttggcttgtatcaaggtaaagcc
aagataacgaaccatcaaaatggacggctttacctcactaacaagaggatcatctacttt
gacaatgacgattgcaaaaatcaaagtgctgcagtagatattaggcacttgacatcggcg
gaactaattgatgggtttctcagatcatcgccaaaagtcaaactatttataaagacagtt
gagaatgatgatcatggaaatggttctgtgttcaacgaaccaaataatgtcacctgggtt
tgcaagatctgctccttcaacaatgtcattgaaggcgcattcaatttgaacttggatgaa
atgccaaagtgcattgcttgtggggtacaccctagtcgagcacaccttgagaatgctctc
gaaaatgctaggtcacgacctacacccactccaagtccagtgccgaatctagattctacc
ctggatgcgagtggttattcaagctctactccctcccataatggccacgaagtattgcaa
ccttctagtcagaggccaacttcattggttacactgacatcaccgggggtttgccccgtt
tgtactttccacaatcacaagtctatcaaattttgcgaaatgtgtggcgcagaagtcaat
tcgatgaacaatgtgagtaattcggtcacaccagagattgataacaacccactttctttg
caattggaatcgcccgagcagtatacaaatggacaaccttatattaagattagtttccgt
aaaggaggcgagaaggagttttttcagcgtgttgcaaatattatagatgaaatcaagtgg
gaaaatttgaaaaaaaaaggtggcattaatcaagatgctaaaaaaatcgagtcaacacaa
tcgccaacgctgaaaaaaaatggatccggagctagagctagagctagagttggcgttgga
gctggagccggactctctgcattggagcaaattggtgaacaacagcgcaaaaagaatgaa
ttgatacttagcacatctttggatgaccttgagcaacttatgtttaaattcaaggatctc
atgaacatctcttcgtcgttgtctcatcttgcctttggtcaacggaaaactgttttgtca
ccattgaatgttagcagatcctcaaagatataccaccaggaattgagccgacatataagc
gagtaccttacaagttataagttgacaaagagtaccgctatgattactttgcaagattta
tttgcagattacaatagggatttggttaaatcgctgggttatgcctgtgagctcattgac
gcttcagatttcaagaagctgattgacttgtttcaatccttgaatttaccggttgtgcaa
gaccgatatgagaattctgatttggttgttgtcaaacctaaaattcatgctgatacttat
ggtgagttcattgtaaagtttttgcaaaaccacgagcagaattgtaaagagattgatttg
cgaagagagctaattgatgatgaaatcacaaacgaagggatggttttcgaggaaggctgt
tatggatcctcggttactcaaatttcacacgctttcaattggtcatataacattaccttg
gaggagctagacaaatcggtcaaaagtggcgagattgtcatagatcaaagcatatcgggg
acattttattatgttaataaatttcggttttcgcaggctgattggcacaacgatgaaaaa
gaaatggttgttatcaaaaactctatcgttgatgagcagaaaaaaattaccatggattta
aaaagagattttaaaagtcaaagacaacatgaccttataagcttgcaacccaattacgag
tttggtgctgtggcggatgatggtgggctcctggaagaatttgccgagactccaccagta
aatgatattccacttcaacaacaactcagtagtattcatttgaatgacttgcaaggatta
aaattttaa
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