Lodderomyces elongisporus: PVL30_001028
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Entry
PVL30_001028 CDS
T01116
Symbol
TBP1
Name
(RefSeq) TATA-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
lel
Lodderomyces elongisporus
Pathway
lel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVL30_001028 (TBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lel03000
]
PVL30_001028 (TBP1)
03021 Transcription machinery [BR:
lel03021
]
PVL30_001028 (TBP1)
Transcription factors [BR:
lel03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PVL30_001028 (TBP1)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PVL30_001028 (TBP1)
RNA polymerase III system
TFIIIB
PVL30_001028 (TBP1)
RNA polymerase I system
SL1/TIF-1B
PVL30_001028 (TBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF4295
Motif
Other DBs
NCBI-GeneID:
5235960
NCBI-ProteinID:
XP_001528542
UniProt:
A5DUM6
LinkDB
All DBs
Position
1:complement(2865958..2866704)
Genome browser
AA seq
248 aa
AA seq
DB search
MDSLKLPTTAAQAKAFTAPNSILFPKGIDGDNTEDSKEFVAEGAASDVKNEKTSDIIEPK
QDEDDSATSGIVPTLQNIVATVNLDCRLDLKTIALHARNAEYNPKRFAAVIMRIRDPKTT
ALIFASGKMVVTGAKSEDDSKLASRKYARIIQKLGFNAKFTDFKIQNIVGSCDVKFPIRL
EGLAFSHGTFSSYEPELFPGLIYRMVKPKIVLLIFVSGKIVLTGAKQREEIYAAFEAIYP
VLSEFRKS
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggattctttgaaattgcccaccaccgctgctcaagctaaggcctttacagcaccaaac
tcgatactttttcccaaaggtatcgatggcgacaatacagaggattcaaaagagtttgta
gctgagggtgccgcttcagatgtgaagaatgaaaagacgtcagatattatcgagccaaaa
caggatgaagacgatagtgcaacgtcaggtatagtacccacattgcagaatatagtcgct
acagtgaacctagattgtcgattagatcttaaaaccattgcacttcatgcccgtaatgcc
gagtataatcctaaacgttttgctgccgtaattatgagaatcagagaccccaaaacaaca
gcgttgatttttgcaagtggaaaaatggtggtcactggtgccaaatctgaagatgattcg
aaattggcatcgcggaaatatgcgcgtatcattcagaaattgggttttaatgccaagttt
actgatttcaaaattcaaaatattgttggttcttgtgacgtcaagtttcctatcagattg
gagggtttggccttttcgcatggtactttctcgtcatatgaacccgaattgtttcctggc
ttaatttatagaatggtgaaacccaaaattgtgcttttgattttcgtctcgggcaaaatt
gttttgaccggtgcaaaacaaagagaagagatatatgctgcatttgaagctatatacccg
gtcttgagtgaattccgaaagtcgtaa
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