Lodderomyces elongisporus: PVL30_001155
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Entry
PVL30_001155 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PVL30_001155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_001155
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
PVL30_001155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Tau95
Motif
Other DBs
NCBI-GeneID:
5234697
NCBI-ProteinID:
XP_001528666
UniProt:
A5DV00
LinkDB
All DBs
Position
1:complement(3207553..3208764)
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AA seq
403 aa
AA seq
DB search
MSSIKTSPVKKEATPNPSPTKRVDVAKNEAKEGNEVGEEGLAAADIGDFDEDPSILSDPE
DYLDENETLDMNLSRGDQKVWLVKLPKYLMEQWSNPENIKSGKLLGNVKIRKDNKGKLDV
RLVLDKKLPSIPQEYDIKMLNTQVRNTYAFTEENLKKFKQELTEVSGMPTQPVLKDVDEK
KKKKFQPRRKFKYFRVQKNGENGGAGPIRKYIPFVKTIPKKTSLLGKVCHDCTVVPSRND
SSYAELLKKRESLVKAPERPKVTLLNEIPGVIQSNAGPSIKGNNTSVFLKSTQPKSKSEG
RAIRMPRKDLLDLLFRCFEEYEYWSIKGLKERTKQPESYLKESLESIATLIKKGPYTSKW
ALKAEYKKLRDAERAARLGLTEEQDKEKENEEEDDDEDMEDVI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagctctatcaagactagccctgtgaagaaagaagcaacgccaaacccatcgccaacc
aaaagagtcgatgtggccaaaaatgaagcaaaagaaggaaatgaggtgggtgaagaagga
ctcgctgcagctgacattggggacttcgatgaagatccttctatattatctgacccagag
gattatctagatgagaatgagactttggatatgaacctttcacgaggagatcaaaaagta
tggttagtcaaattaccaaaatacttgatggaacaatggagcaaccccgagaatataaag
agtggcaagctactaggaaatgtgaaaattagaaaggacaataagggcaaactagatgta
aggttggtcttggataagaaattgccaagcataccacaggaatacgatatcaagatgtta
aatacacaagtacggaacacatatgcatttactgaagagaaccttaaaaagtttaaacaa
gaacttacagaagtcagtggcatgcctacacaacctgtgttgaaagatgttgacgaaaag
aagaagaagaaattccaaccaaggcggaagttcaaatactttcgagtacagaaaaatgga
gagaatggtggcgctggtcctatccgaaaatacattccatttgttaaaaccattcctaaa
aagacaagtcttttgggtaaagtctgtcatgattgtactgttgtgccactgagaaatgac
agtagttatgctgagctactcaagaaacgcgagtctctagtcaaggcaccagagagacca
aaagtgacattgcttaatgagattcctggtgttattcagtccaatgctggaccttcaatt
aaaggtaacaatacatcggtatttttgaagtctacgcaacccaagagtaaatcagaagga
agggccatcagaatgccgagaaaagaccttttggaccttttgtttagatgttttgaggaa
tatgagtattggtcaattaaaggtttgaaggagcgcacaaagcagccggagtcgtacttg
aaggagtcgttggagtccatagccactttaatcaagaagggtccttatacttcaaaatgg
gctttgaaagccgagtacaagaagttgagagatgcagaaagggctgctaggttgggattg
accgaagagcaagataaggaaaaggaaaatgaagaagaagatgacgatgaagacatggag
gatgttatataa
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