Lodderomyces elongisporus: PVL30_001342
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Entry
PVL30_001342 CDS
T01116
Symbol
RPB11
Name
(RefSeq) DNA-directed RNA polymerase II core subunit
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
lel
Lodderomyces elongisporus
Pathway
lel03020
RNA polymerase
lel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVL30_001342 (RPB11)
09124 Replication and repair
03420 Nucleotide excision repair
PVL30_001342 (RPB11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_001342 (RPB11)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_001342 (RPB11)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PVL30_001342 (RPB11)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PVL30_001342 (RPB11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
5233840
NCBI-ProteinID:
XP_001526543
UniProt:
A5DVI5
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All DBs
Position
2:complement(join(123126..123438,123510..123562))
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AA seq
121 aa
AA seq
DB search
MNAPDRFELFILPDGVDKIKITPDTKVPNAAIIKIEREDHTLANLLRAQLLKDPRVIFAA
YKVEHPLFANFVLRIQTEEDYTPKEALKNACNMLINELGAIKSKFSEEWALKVLLNNEDD
Y
NT seq
366 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccagatagattcgagctcttcattcttcccgatggcgttgataaaatcaag
atcacaccggacacgaaagtacccaatgctgccattattaaaattgagagagaagaccat
acattggcaaacttgttgcgtgcacagctattgaaagaccctcgtgttatatttgctgct
tataaagttgaacatccattatttgcaaattttgtcttgcgtatacagacggaggaggat
tatactccaaaagaggcattaaaaaatgcttgcaacatgttgattaatgaattgggtgca
atcaaaagtaaattctcagaagagtgggcccttaaggttcttttgaacaacgaggatgac
tattaa
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