Lodderomyces elongisporus: PVL30_001360
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Entry
PVL30_001360 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K10259
F-box and WD-40 domain protein MET30
Organism
lel
Lodderomyces elongisporus
Pathway
lel04111
Cell cycle - yeast
lel04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PVL30_001360
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PVL30_001360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lel04121
]
PVL30_001360
Ubiquitin system [BR:
lel04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PVL30_001360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_Gbeta
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_WDR75_1st
F-box-like
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_Nup120_160
F-box
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_SPT8
WD40_like
Beta-prop_DCAF12
Beta-prop_ACSF4
BBS2_Mid
PAC11
Beta-prop_NOL10_N
TRM82_WD
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
F-box_4
Beta-prop_Vps41
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
5234153
NCBI-ProteinID:
XP_001526562
UniProt:
A5DVK4
LinkDB
All DBs
Position
2:171033..173396
Genome browser
AA seq
787 aa
AA seq
DB search
MDLNNSCLPEQSSTSSNSLGDLVSTSTAIPSNNNNNNNNNNNMSFNRSSSLPPHSSTKST
IVADSTNVTSHPHESNSYSVNTRSSHIITSISEPAHSVESENEINSAITAAADATTRGLI
PGANRDADADADAEAEADVDVEATSSSNNVTPHQDVSVVTPFLVKHISNQNLIPKDNFHT
YCYRHNPDISCNKQTDERKMKQIQNKLENLPHRDQQAISHVWSIFSAAPVHHRQLILQGL
LTQCCFPQLSFISQEVSSLIKIDFISILPQEISLKILCYLDCNSLCNAAQVSRKWKSLAD
DDRVWHHMCEQHIDRKCPNCGWGLPLMHMKRAREMTEDDIKPIRRTSEGEAQLSQEVSGN
TTQNNNNSNSNNNANTNNADISVNTSQRRRASQSSQDEPLHKKPRANSSSTTTKPVHSPL
LRKRPWKAVYSERFKLEKNWRKGVYSMKSFVGHTDGVTCLQFNRKYLMTGSYDTTIKIWK
IETGECVKTLTGHTKGVRSLVFDNQKLITGGLDSTIKVWNYHTGQCIATYRGHDDAVVSV
DFSNKSIVSGSADHTVRVWHVDSRTCYTLRGHTDWVNCVKIHPASNTIFSASDDTTIRMW
DLTTNQCLKIFGGVENNGHIGQVQCVIPLTYKDQLVEDVSDTEDDQAVGESATTASVSAS
TSTSSSSSSPVPLASTAASTNTTTPAVNYPTHLLTSSLDNTIKLWDVATGKCIRTQFGHI
EGVWSIAADTFRIVSGAHDRMVKVWDLQNGKCLHSFGNSSSVSCVGLSDSRFVSGMENGE
VKMYCFD
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaataacagttgcttaccagaacagtcatctacatcatctaactctttgggt
gatttggtatctacatccacggcaataccttccaacaacaacaacaacaacaacaacaat
aataatatgtcatttaatagactgctgtcattgccaccacactcatcaaccaaatcaacc
attgttgcagactcaacaaacgtaacatcgcatccacatgaatccaactcgtattcagtt
aacactagatcatcacatattatcacatccatttctgaaccagctcactctgttgaatct
gaaaatgagataaactcagcaataacagcagcagcagatgcaacaacgaggggtttaata
ccaggagccaatagagatgcagatgcagatgcagatgcagaggcagaggcagatgtagac
gttgaggcaacactgctgtctaataatgttactccgcatcaagatgtctcagtagtgaca
ccattcctagtcaaacatataagcaatcagaacctcataccaaaggacaatttccacact
tattgttaccgccacaaccctgatatactgtgcaacaaacaaacagatgaacgaaaaatg
aagcaaatacaaaacaagttggaaaacctcccgcacagagaccaacaagcaatcagccac
gtatggtctatttttagtgcagcaccagtacaccatcgccagttgatcctacaaggcttg
ctcacacagtgctgtttcccacaactatcattcatctcacaagaagtgtcatcattgatc
aaaatcgactttatatccattttaccacaggaaatatcgttaaaaatcttgtgttacttg
gactgtaacagtctttgcaatgcggctcaagtgtccagaaaatggaagagtctcgctgac
gacgatagagtatggcaccacatgtgtgaacagcacatagatcggaaatgcccaaactgt
ggatggggattaccattgatgcatatgaaaagagcaagagaaatgaccgaagatgatatc
aagccaataaggagaacttcggaaggagaagcacaattgagccaagaagtttcaggaaat
actactcaaaacaataacaacagcaatagcaacaacaacgcaaacacaaataatgcagat
attagtgtcaatacatcacagcgccgccgtgcatcacaatcgtcacaagatgaaccattg
cacaagaaaccaagagcaaacagcagttcaacaacgactaaacctgtacattcaccatta
ctccgcaaacgtccatggaaagctgtttattctgaacggttcaagttggagaaaaactgg
aggaaaggagtttactctatgaagtcttttgtcggccataccgatggcgtgacttgcttg
caattcaatagaaagtatctcatgacaggctcatacgatactacaatcaagatctggaag
attgaaactggagagtgcgtcaagacattaacagggcacacaaagggagtgagatccttg
gtgtttgacaatcaaaagctaatcactggaggattagactcaacaataaaagtgtggaat
taccacacgggtcaatgcattgccacctataggggacacgatgatgccgtggttagtgtt
gatttttcaaacaagtctattgtttcagggtcggctgatcatacggtccgtgtatggcat
gtcgactcaagaacatgctatacattgcgcggccacacagattgggttaattgcgtcaag
atacatccagcatcaaatacaatcttcagtgctagcgacgacacaacaatacggatgtgg
gatttaactacgaaccaatgtctcaagatctttggaggagtggaaaataatggccacatt
ggtcaagtgcagtgcgtcattcctttgacatacaaggaccaacttgttgaggatgtgagt
gataccgaggatgaccaagcagttggcgagtcagccactacagcttcagtttcagcttca
acttcaacttcgtcatcttcatcatcaccagttccattagcttctacagctgcttcgacc
aatactactactcccgcagtcaactatccaacacaccttctcacttcttctttggacaat
accatcaaattatgggatgtagccactggtaaatgcattcgtacccagtttggccacatt
gaaggtgtatggtccattgccgccgatacttttagaattgttagtggcgcccacgatcgg
atggtgaaagtgtgggacttacagaacggcaagtgcctacacagctttggcaacagttcg
agtgtttcatgtgtaggtttgagtgattcacgatttgtgagcggcatggaaaatggtgaa
gtaaagatgtattgttttgactag
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