Lodderomyces elongisporus: PVL30_001484
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Entry
PVL30_001484 CDS
T01116
Symbol
VTS1
Name
(RefSeq) Flap-structured DNA-binding and RNA-binding protein
KO
K27407
RNA-binding protein VTS1
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_001484 (VTS1)
04131 Membrane trafficking [BR:
lel04131
]
PVL30_001484 (VTS1)
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PVL30_001484 (VTS1)
Membrane trafficking [BR:
lel04131
]
SNARE
SNARE associated proteins
Others
PVL30_001484 (VTS1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
AvrRpt-cleavage
Motif
Other DBs
NCBI-GeneID:
5234181
NCBI-ProteinID:
XP_001526686
UniProt:
A5DVX8
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Position
2:complement(506720..508996)
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AA seq
758 aa
AA seq
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MDFNDVDDNQRSTAPDYHAARQQSVGSKLQHELEALLDLDLSNQRSSQSAPPDPNQTQHH
NHNHNQNQNQTQNQNQNQTQTTNSNQSENLTSQNPAALPASIPDSISLTPGHDELSSQKT
NGLNSNTNLVAPAAGKFVNQGGISSSLLNSSLAGFNSQRDGGYNTLSSPMPSQIIGLSGN
GSVVSAGQPQVGSLLQHSTSNPERPRSATDYTSIFNKPGKAFTNFSTSNLLSESNAQPSL
SSPQVPASQVAAPPVPSVPSVPSVTTSQSNFYSDLLVFSNWIENLNPHDTVAMIDYLCAS
LSIDILLTFQSKFNSFLDNPSAHQFSGQHGQAFSASPFNNSYGQDFTTGMENLTISHDHG
KQKFKQSMNTFNSNANAFQSPLSPPTHQQAPHTQSSLHGANHFLNIERGIVRPKSADPFL
QNQKQQQQQQQQQQQQSFDRAKSPASHLHEKTNFLQLAAASKHNAGYSSNFHNPYGGVGY
QQFYPTSSSASTSASAPGVSLGPGPSASNVQAGQQSSINGPHQDETTDMSHAALKLGALA
TINSRVALDSHKKYPYWNNHTHNHNNHNNHNNHNQHQRHQNQMQNQHSQSQISPPHSEQF
TNSLNSSNAASYEDSLKRSANSQSVPTVGGNHTVGNSGINQRSNFNNPSTGFKKRGSSPI
SSVQMQHQNLSSSSVNSQSGTSSFTSLPLEVTSLELLNNIPAWLKLLRLHKYTDSLKDTH
WKDLIELDDEALEKKGVAALGARRKLIKAFDMVKQTHL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggactttaacgatgtcgatgacaaccaaaggtcaacagcgccagactatcatgcagca
cggcaacagagcgtagggtctaagttgcaacatgagctagaagctttgttggatttggat
ttaagcaatcagcggtcctcacaaagtgctcctcccgacccaaaccaaacccagcatcac
aatcacaatcacaatcaaaatcaaaatcagactcaaaatcaaaatcagaaccagacacaa
actacaaattcaaatcaaagcgaaaaccttacatctcaaaacccagctgctttaccagca
agcatacctgactccatatctttaactccaggtcatgatgaattgtcatcacaaaaaacg
aatgggttgaattcaaacacaaacttagtcgcacctgctgctgggaaatttgtcaaccaa
ggtggaatttcatcatccttactcaactcttcgttggctggtttcaattctcaaagagat
ggcggctataatacattatcgtctccaatgccgtcacaaattattggtcttagcggtaat
ggtagtgtagtatctgctggtcaacctcaagtgggtagtttattacaacattcaacttcc
aaccccgagagaccacgatcagccactgattatactagtattttcaacaaaccaggtaaa
gctttcaccaattttagcacactgaacttgctttcagaatcaaatgcccagccgagcttg
tcatccccacaggtaccagcctctcaagttgctgctcctccagtcccttcagtcccttca
gtaccctcagtgacaacatcacaatcaaatttttatctggatttactagtttttagcaac
tggattgaaaacttaaacccacatgacactgtagcaatgattgattatttatgtgctagt
ctatcgattgacatcctactcacttttcaatctaaatttaattcttttttggataatcca
tcagcccaccaattttctggtcaacatggtcaagcgttttcggcttccccattcaacaac
agttatggtcaagatttcaccactggtatggagaatctaaccattagtcatgaccacgga
aaacaaaagtttaagcagctgatgaacacattcaatagtaatgccaatgcattccaatca
ccattatctccaccaacacatcaacaagcaccacatactcaatctctgctacatggtgct
aaccattttttgaacattgaacgaggtatcgtgcgtcctaaatctgccgaccccttttta
caaaaccagaaacaacagcagcagcagcaacagcaacaacagcaacaactgtttgataga
gcaaaatctcctgcgtcacatctccatgaaaaaacaaattttttgcaattggccgcagcg
tccaaacataacgctggctactcttcgaattttcataatccatatggcggtgtaggttat
caacaattctatcccacctcatcatctgcttcaacctctgcttctgcaccaggtgtaagc
cttggacctggcccctcagcgtcaaatgtgcaagccggtcaacagctgagtattaatggt
cctcatcaggatgaaaccactgatatgtcacacgctgctcttaagcttggtgcattggcc
actataaattcaagagttgcattagatagccataaaaagtacccatattggaacaatcac
actcacaaccacaacaaccacaacaaccacaacaaccacaatcaacatcaacgtcaccaa
aaccagatgcagaaccaacatctgcaactgcaaattctgccaccacatctggagcagttt
acaaactcgttgaatagctctaatgcagcaagttatgaggactccttgaaaagatctgca
aactcgcagtcagtccctactgttggtggaaatcacactgttggcaatagtggtatcaat
cagagatccaatttcaataatccctcgaccggattcaagaaacgtggatcttcgccaatc
tcttctgttcaaatgcaacaccagaacttgtcgtcttcttctgttaacagtcagtctggt
accagttcattcacgtctttacccttggaagttactagtttggaattattgaataacatc
ccagcgtggttaaaactacttcgattacacaagtatactgattctttaaaggatacgcat
tggaaggatttgattgaacttgatgatgaagcattggagaagaagggtgttgcagcatta
ggtgctagaagaaagctaattaaagcgttcgatatggtcaaacaaacgcacttatga
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