Lodderomyces elongisporus: PVL30_001671
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Entry
PVL30_001671 CDS
T01116
Symbol
MSD1
Name
(RefSeq) aspartate--tRNA ligase msd1
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PVL30_001671 (MSD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lel01007
]
PVL30_001671 (MSD1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lel03016
]
PVL30_001671 (MSD1)
03029 Mitochondrial biogenesis [BR:
lel03029
]
PVL30_001671 (MSD1)
Enzymes [BR:
lel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PVL30_001671 (MSD1)
Amino acid related enzymes [BR:
lel01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PVL30_001671 (MSD1)
Transfer RNA biogenesis [BR:
lel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PVL30_001671 (MSD1)
Prokaryotic type
Other AARSs
PVL30_001671 (MSD1)
Mitochondrial biogenesis [BR:
lel03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PVL30_001671 (MSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
DUF4340
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
5233740
NCBI-ProteinID:
XP_001526870
UniProt:
A5DWG2
LinkDB
All DBs
Position
2:complement(975752..977845)
Genome browser
AA seq
697 aa
AA seq
DB search
MFYTAFGGCSKRLYSTLPEKASTLAKFNFPYSTGTIGSITTQLDKYLNRKDTLITLHGHI
DRKSRIRPTVGFGFLRDQEGDVIQFIADADNNEHQSVLEKMKKLTVEDSISITGYAKPKV
GKEQGRQEETAMATRSRTEDASKKPKAWELVVKDLQILNSSNLDASRLEKLKQTDPEDIP
PQFRYLQLRTKFFQSALRTRSKIAQLVRNTLVNNHDFVEIETPLLFKSTPEGAREFLVPT
RTYDQFYALPQSPQQYKQILMASGFTRYFQLAKCFRDEDLRADRQPEFTQVDLEMSYINS
AEQIMKVVEDVVMNIWSKICNRPTYTLNEKGFLQKLTDIDNNKVQFSKLAYPEALSKYGI
DKPDLRSDITFITLDEFFIGEENSEFSVVEACVLRNALDNENKSSKNKLPKELTSTHNYS
RRRPYVWAIRNDKDLLWYEKLVEKKFMKKTNHFDEKKLKTILNLKPGDILAISTRSKFPY
ENPTPLGKFRQLAIKEFPGKWQRPIEKESGELVNDYKFEDMVVGSWVVDFPLFNPVEISS
STEDPYPEYSMNKYESTHHPFTMCKSEDYELMGSNPLQVRGEHYDLVINGVEVGGGSRRI
HDPALQKYVFEEILQIKHYDQLFGHLLKALSMGCPPHAGLALGFDRLCAMVVGSSSIRDV
IAFPKNQSGKDLVVESPTEVSEKALNEYFITKKNNNK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgttctacacagcatttggaggatgtagtaagaggttatactcgacactaccagagaaa
gcatcaacattggcgaaattcaatttcccatattcaacaggtacaattggaagtattaca
acacagttggacaagtatttgaatagaaaggatacgctaattactctacatgggcatatt
gatagaaaatcacggatacgacctacagttgggtttggatttttaagagaccaggaagga
gacgtgatccagttcatagccgatgccgataataatgaacatcaactggttctcgaaaag
atgaaaaagcttacagttgaagactctataagtattacgggctacgctaagcccaaggtg
ggtaaggagcaaggaagacaagaagagactgcaatggcaacaaggtcaagaacagaagac
gcaagtaaaaaaccaaaagcttgggaattggttgtcaaagacttgcagattcttaattcg
tcaaacttggacgcatcgaggttggagaaactaaaacaaacagatcctgaagatatacca
cctcaatttcggtacctacagcttcgaaccaaatttttccaaagtgcacttcggactcga
agcaaaattgctcaattggtgagaaacacacttgtaaataatcacgatttcgtcgaaatt
gaaacacctttgcttttcaaatccacccctgaaggagcacgagagtttttagtcccaaca
cgtacgtatgaccagttttacgcattaccgcaatcaccacagcaatacaagcaaattttg
atggcctccgggtttacaagatatttccaacttgccaaatgtttccgtgatgaggatttg
agagcagatagacaaccggaattcacacaagtggatttggaaatgagctacattaatagt
gcagaacaaatcatgaaagttgttgaagatgttgtcatgaacatctggctgaaaatttgt
aatcgtccaacttatacattaaacgaaaagggttttttacaaaaattgacagacatcgat
aacaataaagtgcagtttagcaagttggcataccctgaagcgcttctgaagtatggtatt
gataaaccagacttacgatctgatatcacctttattacgttggatgaatttttcattggt
gaagagaattcagaattcagcgttgttgaagcatgtgtattgcgaaatgctcttgataat
gagaacaagagtagtaaaaataaattgccaaaagaattgacaagtacacataattacagc
agaagacgtccatatgtctgggctattagaaacgataaagatcttttatggtatgaaaag
cttgttgagaaaaaatttatgaaaaagacaaatcattttgacgaaaaaaaattaaagaca
atactcaatcttaaaccaggagatattcttgcaatttccacaagatcaaaattcccatat
gagaacccaacgccattgggaaaatttaggcaacttgctattaaagagtttcctggcaag
tggcagagaccaatagaaaaagagtctggtgaactagttaatgactacaagtttgaggat
atggtagttggatcatgggttgttgatttccctttatttaatccagtagaaataagcagt
tcaacggaggacccatatcctgaatactccatgaataaatatgaatccacgcatcatcct
ttcaccatgtgtaaatctgaagattacgaacttatgggatcaaacccactacaagttaga
ggtgagcattatgacttggtcatcaatggtgttgaagtcggcggaggctcgcgaagaata
cacgatcctgctttgcagaagtatgtattcgaagagattttgcagataaaacactatgac
caattgtttggccatttattgaaagcactaagtatgggatgccctccgcatgccggattg
gcattgggttttgatagattatgtgcgatggtggtgggctcatcgagtatacgagatgtg
attgctttcccgaaaaaccaatcaggcaaggatcttgtcgttgaaagccctacagaggtt
ctggaaaaggcattaaacgagtattttattacaaaaaaaaataataataaatag
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