Lodderomyces elongisporus: PVL30_001912
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Entry
PVL30_001912 CDS
T01116
Symbol
MSI1
Name
(RefSeq) Chromatin assembly complex, subunit 3
KO
K10752
histone-binding protein RBBP4
Organism
lel
Lodderomyces elongisporus
Pathway
lel03082
ATP-dependent chromatin remodeling
lel03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PVL30_001912 (MSI1)
03083 Polycomb repressive complex
PVL30_001912 (MSI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_001912 (MSI1)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PVL30_001912 (MSI1)
Histone modification proteins
HAT complexes
HATB complex
PVL30_001912 (MSI1)
HDAC complexes
Sin3A-HDAC complex
PVL30_001912 (MSI1)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PVL30_001912 (MSI1)
PRC2.2
PVL30_001912 (MSI1)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PVL30_001912 (MSI1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
PVL30_001912 (MSI1)
Chromatin remodeling factors
NuRD complex
PVL30_001912 (MSI1)
NuRF complex
PVL30_001912 (MSI1)
NuRF complex (fruit fly)
PVL30_001912 (MSI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
ANAPC4_WD40
WDR55
WD40_MABP1-WDR62_2nd
MIOS_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
5233685
NCBI-ProteinID:
XP_001527110
UniProt:
A5DX52
LinkDB
All DBs
Position
2:complement(1611648..1613135)
Genome browser
AA seq
495 aa
AA seq
DB search
MDEIETKSEIKPPVTDSKAENLLTAEIASDSAPVGETELGTGAPVEESLIDESTEKKYRI
WKKNAPFLYDYLSTNSLLWPSLTIQFFPDITHKSSVINYEQNENPNDEKNDETSESDVIL
QRLLHGTFTMGQSPVDSISILQVPTYTNLNKKIVINKLDYNQEKEEFELNLSQSSSSNMK
PKVLQKINQYGDVNKLKYMPQKPNVIASANNYGDLIIFERTRHKSFQKSIVDDTQVNKVQ
IRLVNDQVPTEQKVEIYAMDWNKNMEGLLVSANMNGIINLHDVTKYNKSSNSLKQERYWQ
HGSGVNDIEWVPTHDSLFGVTDEAGNLSIYDTRESSQKPKIQASFGTSLNSISINPNFPS
IIAVGDSKGVIHIRNLQNLNEPLYELKDVHQGAITQLKWHPKFAQVLASSSTDSSVKIHD
LSILENGKGLDTSVESNVDTNHKRSATIFQHLGHMLGVNDFDWSFADDWMIASVADDNSL
HIWKPPLQVVESVNP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaattgaaaccaaaagtgaaattaaaccaccagtgacggattcgaaagcggaa
aacttgttaactgctgaaattgcttctgactctgctcccgttggtgaaactgaattaggt
acaggtgcacctgtcgaagagtcgcttattgacgaactgacagagaagaaatatcgaata
tggaagaagaatgcgccatttctttatgattacttgtcaacaaattcccttctttggcca
tccctcacgattcaattcttccctgatatcactcataaatcgtcggtaattaattatgaa
caaaatgagaacccaaatgacgaaaaaaatgatgaaacttcagagtctgatgtgatctta
caacgtctattacatggaacattcactatgggccaatctccagtagattccatttcaatc
cttcaagttcctacatacaccaacctcaataagaaaattgtcattaacaaacttgattac
aatcaagagaaggaggagtttgagctcaacttaagtcagtcctcttcatcaaatatgaaa
cccaaagtcttgcaaaaaattaaccagtacggagacgtcaacaaactcaagtacatgcca
caaaaaccaaacgtcattgcgagtgccaacaattatggtgacttgatcatatttgaacgt
acgcgacacaaaagttttcaaaaactgattgttgatgatacccaggtaaataaggtgcaa
atacgattggttaatgatcaagtaccgactgagcaaaaagtagagatttacgcaatggac
tggaacaagaacatggaaggtttacttgtgtcggcaaatatgaatggaatcattaacttg
catgatgtcaccaaatataataagctgagcaactctcttaaacaggaacgatattggcag
cacggtagtggtgtcaatgatattgagtgggtccccacgcatgattcattatttggagtt
accgatgaagcgggaaatttgagtatttacgatacaagagaactgctgcagaaaccaaaa
atacaggcctcgtttggtactagtcttaattctatttctattaatccaaattttccatcg
ataatagctgttggtgattcaaagggggtgattcatataagaaatcttcaaaatttgaac
gaaccattgtatgagttaaaagatgtgcatcaaggtgcaataacacagttgaaatggcac
ccgaaatttgcccaagtgcttgcttcttcttctactgatagcctggtgaagatccacgat
ttgtcaattttagaaaatggaaaaggtttagatacaagtgttgaactgaatgttgatacc
aaccacaaaaggtcagcaacaatatttcagcatttgggtcacatgcttggtgtgaatgat
tttgattggtcatttgcagatgattggatgattgctagtgtggctgatgataactctcta
catatttggaagccacctttgcaagtagttgaatctgtaaatccttaa
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