Lodderomyces elongisporus: PVL30_001980
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Entry
PVL30_001980 CDS
T01116
Symbol
TFC4
Name
(RefSeq) transcription factor TFIIIC subunit tfc4
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_001980 (TFC4)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
PVL30_001980 (TFC4)
TFIIIC, fungi type
PVL30_001980 (TFC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_6
ANAPC3
TPR_11
New_glue
ARM_TT21_5th
FAM199X
DUF6584
TPR_EMC2
HAT_PRP39_C
PPR_2
Motif
Other DBs
NCBI-GeneID:
5233753
NCBI-ProteinID:
XP_001527177
UniProt:
A5DXB9
LinkDB
All DBs
Position
2:complement(1775372..1778647)
Genome browser
AA seq
1091 aa
AA seq
DB search
MVRNKVHSSENFFLSEEVSGINYQKFNGAIENNSYTEKEEAAEEANEDEEKNEEDKEEDR
LNQVLDELEATNFDIDSDSDHGKNNSFINKRLRNDDEEEDDDDEEEDDDDDEYDEDDDEN
FGGDLGNEFSEDDDDADDDFLMEDSEEGDDYDDYDDGYDLKDALKKAGNFKVKNKKAKLA
NTGKTSSSYKSRMMRTENRELDPEVRMLLSQANEAFVRNDLQVALGLYTDVIKKDARNFH
AYKAIGEIHKNLGNLNECCNFWVLAANLHSWDHEFWSQVAELSADLGHIDQAIFCYGRAI
TSDIKKSSRFIMQRAILYKEKHQFGKALDGLQKVRSVYPTNPEVYKHIASVYSEQRRLND
AINLYMKMLDWNINEDINSAEVYPKFDWSELNILLELHIQHRSFRNGLTVLKLTARWIQD
RSQEVWDDQDDSEFDVKRRFKNSHKLSAVARQAFNTKRFELPIDIRFKLGVLRLGAGDNE
EALHHFEYLLDEDPSSISDLYFEAGKHLEDVGLYEEALLYLTRVEDEPSPELVRLLGKCY
IEGGDFLQAKYAYEDLLSLEPENADYKLSLAETLYHLGEETRAEHLINEVQRANSSTATA
TATATATATATATATATTTATATATTTTTTMPEAIDNESPENLSLIRNRIRKAAKRVRLT
ELEKQEIELNAKRKVLEKYTRMERLQDAVDEGDKIAISAWIQLASQLVEMFTKTKSFFPK
DRMKKFRGIFRRNTSKKMNLDERLARAYNLLEGIDDDDNLGRHTLTSMTEFRGLNYQQWF
EIFAQYALLLWRYEYDPGHADEILNVALSASIFAQDKNKEIILQVLKVSFGISENLPSTT
VQTHTRNLLNLNQFSPFVYKFYLCCYASGLKFWENFACYNQQKYFLRQLKAYDSTFSGVP
ISGMALVNANVSNIALGKCLPDLVYIYANMLGGNRSYISSIFYMNRAYEFNNKDHMICLI
LALLHIHRSMQRLTSNRHNQLLQGISYFLEYKDLRLGGKEVGKAGEAGEAGEATIYEQQE
VEYNFGRLFHMLGLSSLAVQHYNRVLALSDSNHLEEDYDLATEAAYNLTLIYNLNGNSLL
ARDLTEKYLVL
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcaacaaggttcattctagtgagaacttttttctttcagaagaagtaagtggt
ataaattaccaaaaattcaacggcgcaattgaaaacaattcctatactgagaaggaagaa
gcagcagaagaggcaaatgaagacgaggaaaaaaatgaagaagacaaagaggaagacagg
ttaaaccaagtgctagatgagctagaggctaccaattttgatattgatagtgatagcgat
cacgggaagaataacagttttataaataaaagattaagaaacgatgatgaagaagaagat
gacgacgatgaagaagaagatgatgatgatgacgagtatgacgaggatgatgatgaaaat
tttggtggcgatcttggcaatgaatttagtgaagacgatgatgatgccgacgatgatttc
ttgatggaggattcggaagagggcgatgattacgatgactatgatgatggatatgacttg
aaagatgccctcaagaaagcggggaatttcaaagtcaaaaataagaaagcaaaactagct
aatacaggaaaaacctcatcctcgtacaaactgaggatgatgaggacggagaatcgagaa
ttggatcctgaagtgcgaatgcttctatcgcaagctaatgaagcatttgtgagaaacgat
ttgcaagtcgcattgggcttgtatacagacgtcatcaagaaagatgctcgaaatttccac
gcatacaaggcaattggtgaaattcataaaaatttggggaatctaaacgagtgctgtaac
ttttgggtcttggctgccaacttgcattcctgggaccatgagttttggagtcaagtagcc
gagctctctgccgaccttggacatattgatcaggcaatattctgctatggtagagcaata
acttcggatatcaagaaatcttctcgctttattatgcaaagagccattctatacaaggag
aaacaccaatttggaaaagccttggacggccttcaaaaagttcgtctggtttatccaact
aaccctgaggtatacaaacacattgcaagtgtatattctgaacagcggcgattgaatgat
gctataaatttgtacatgaagatgcttgattggaacatcaatgaagacatcaattccgct
gaagtgtaccccaagtttgattggtcagagctaaacatattattggaactacatatacaa
catcggtcttttagaaatgggttaaccgttttaaaactaacggcaagatggatccaggat
aggtcgcaagaggtgtgggacgatcaagatgattcagagtttgatgtgaaaagaagattt
aaaaattctcataagcttctggcggttgctcggcaagcttttaatactaaaagatttgaa
ctacccatagatataagattcaagttgggtgttttgcgactaggcgcgggtgacaatgaa
gaggctctacaccattttgaatacttgctcgatgaagaccccagctccatttctgacttg
tattttgaagctggtaagcatttggaagatgttgggctctacgaggaagccttactttat
ttgacaagagtagaagatgaaccttctccggaattggttcgtcttttgggtaaatgttac
attgagggcggtgattttcttcaggctaaatatgcatacgaagacttgctcagtctagaa
cccgaaaatgctgattataagctttcactagcagagacattgtatcatttgggtgaagaa
actagagcagagcatttgatcaatgaagtgcaaagagccaactcgtcaacagcaacagca
acagcaacagcaacagcaacagcaacagcaacagcaacagcaacagcaacaacaacagca
acagcaacagcaacaacaacaacaacaacaatgccagaagctattgataatgaactgcct
gaaaacttgtctttgatcagaaatagaatccgcaaggctgcaaagcgtgtacgactaact
gagcttgagaaacaagagattgaattgaatgcaaaaagaaaagttttggagaagtatacc
cggatggaaaggctccaagatgcagttgacgaaggcgacaaaattgcaatttcggcttgg
attcaattggcatcgcagcttgttgaaatgtttacaaagaccaaaagctttttccccaag
gataggatgaaaaaatttagaggcatatttcgtaggaatacaagtaaaaaaatgaatttg
gacgaaaggcttgcgagggcatacaatttattggaaggcatcgatgacgacgataatctt
ggacgtcacactttaacttcaatgactgaatttagaggattgaattaccagcagtggttt
gagatatttgcccaatatgctttgttgttatggagatacgaatatgacccaggtcatgca
gatgagatcttaaatgttgcattgagtgctagtatatttgctcaagacaaaaataaggaa
atcatattgcaggtgttgaaggtgctgtttggaatttcggagaaccttccttcgacaact
gttcaaacacatactagaaatttgctcaacttgaaccaattttctccatttgtgtacaag
ttttatctatgttgctatgcctccgggttaaaattttgggagaattttgcatgttacaac
caacaaaaatatttccttcgacagctaaaggcatatgactcgacatttagtggagttcct
atctctggtatggccttggttaatgcaaatgtatccaatattgccttgggaaaatgtctt
ccagacttggtatacatctatgccaatatgctaggtggaaacagaagttatatttcctct
attttctacatgaatcgtgcttacgagtttaacaataaagaccacatgatttgtttaatt
ttggcgcttcttcacattcatagatcaatgcaaagacttacatccaataggcacaatcaa
cttcttcaaggtatcagctattttttggagtacaaagacttgcgtctaggcggaaaagaa
gttggtaaagctggtgaagccggtgaagccggtgaagctaccatttatgaacaacaggaa
gtcgagtacaactttggcagactttttcatatgcttgggttatcttctcttgcggtgcag
cattataatagagttttagctcttctggatagcaaccatttggaagaagattatgatttg
gccaccgaggctgcgtataacctcactttgatctataacttgaatggaaatagtttgtta
gctcgcgacttgactgaaaaatatttagttttgtga
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