Lodderomyces elongisporus: PVL30_002004
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Entry
PVL30_002004 CDS
T01116
Symbol
SEC13
Name
(RefSeq) GTPase-activating protein S13
KO
K14004
protein transport protein SEC13
Organism
lel
Lodderomyces elongisporus
Pathway
lel03013
Nucleocytoplasmic transport
lel04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVL30_002004 (SEC13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
PVL30_002004 (SEC13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_002004 (SEC13)
04131 Membrane trafficking [BR:
lel04131
]
PVL30_002004 (SEC13)
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PVL30_002004 (SEC13)
Membrane trafficking [BR:
lel04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
PVL30_002004 (SEC13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
PVL30_002004 (SEC13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
PVL30_002004 (SEC13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
DUF3888
Motif
Other DBs
NCBI-GeneID:
5233653
NCBI-ProteinID:
XP_001527200
UniProt:
A5DXE2
LinkDB
All DBs
Position
2:1847448..1848356
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AA seq
302 aa
AA seq
DB search
MVTIGNAHEDLIHDAVLDYYGKRLATCSSDKTIKIYDIEGTENYKLTATLTGHEGPIWQV
AWAHPKFGSILASCSYDGKVLIWKEQQDTQQWSIIAEHTIHQASVNSVSWAPHELGAVLL
CTSSDGKVSVVDFNDDGTTSHVIFDAHAIGVNSASWAPFTAASSTSSKDANTLKQHRRFV
TCGSDNLVKIWKYDTASETYAEEAKLEGHTDWVRDVAWSPSNLVRPYIATASQDCTVLIW
TQDKDGKWQSQPLTEEKFPDVCWRCSWSLSGNILAVSGGDNKVTLWKENLQGKWESAGEV
EQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaattggaaacgcacacgaggaccttattcacgatgccgtgctagactattat
ggtaaacgattagcaacatgttcatcagacaaaaccatcaaaatctacgacattgaaggc
acggaaaattacaagttaactgctacattgactggccacgaaggaccaatttggcaagtg
gcatgggcacacccaaagtttggctccatcttggcctcttgctcctatgatggaaaagtc
ttgatttggaaagagcaacaagatacacaacaatggtcgattatcgctgagcacacaatt
catcaagctagtgttaactcagtgagttgggctccacacgaattgggagcggtgctatta
tgtacttcatctgacggtaaagtttcagtagtggatttcaacgacgatggtacaacctca
catgtgatctttgacgcacacgccattggtgtaaattctgcttcatgggctccatttaca
gctgcatcatcaacctcgtcgaaagatgcaaatacattgaaacaacaccgcaggtttgtc
acatgtggttccgacaatttggtgaagatttggaaatatgatacagctctggaaacatac
gccgaagaggctaagttggagggccataccgattgggtgcgagacgttgcatggtcgcca
tccaacctcgtgcgtccgtatatcgctacagcatcacaggattgcaccgttttgatctgg
acccaagataaagacggtaaatggcaaagtcagccattgactgaggaaaaatttcctgat
gtatgctggagatgttcgtggtctttgagtggaaacattttggctgtttcaggtggcgat
aataaggttactttatggaaggagaatttgcaaggaaaatgggaatcggctggagaagta
gagcaatag
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