Lodderomyces elongisporus: PVL30_002053
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Entry
PVL30_002053 CDS
T01116
Symbol
UTP20
Name
(RefSeq) U3 snoRNP protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lel03009
]
PVL30_002053 (UTP20)
Ribosome biogenesis [BR:
lel03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PVL30_002053 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
5233874
NCBI-ProteinID:
XP_001527251
UniProt:
A5DXJ3
LinkDB
All DBs
Position
2:complement(1979759..1987486)
Genome browser
AA seq
2575 aa
AA seq
DB search
MAVKVKSTESSRRHAFKSFRERVDSIKIEPSRRLEKRVHDEVESSHLLTTLEHWKELNLS
KVFTELVDSIEELCQSLPQVLHYQLRIFEAIYNAIKQNDVHSLQPSLELLTQFIHDLGPD
FLAYYLKTLHLLSEVALAQNPNDFQNNRNSSNALDWIFNALAFAFKYLVRYLVEDLKPTF
QELAPLLKLKKQTYISRFCAESLSYLIRKSGSKSLNEIVEFSLESQVQDVIDNDNYCESL
KIMYSESMKNTTGTFHTKAKAILSSILNCIVFKNDQRLSSQQEQSQQQQQQQQLQQQKEA
VQPKLTSLLSDILLDVLHHGEQEACAKFYEMVTLSLQELLEKNPKCTLSLLVSCQILSTL
SFADSGRKVSDWSCVLTTVDKIITKLNSIQSLPRELTESFVYLLVITFRNADSQALIKYQ
KRFFQVMITINEGNDFLLFAESALAVAGSKVEKFAIGKHIQDYINRAVDSADKMKRVILF
LNHAGKQNLIKQTFTIPSKSVEKLSIAATADIDSKSYYDLYWKLLIFNYAKTCQINVDLL
TQTLFELPDDVLGRESASMILSILYRKISEQTEIEKKGETLSSNENVCRILAYLDQDFVR
LNQSSSFLKTMNDFVKFATDPQVFLQRALDCLYLPSHETRENAIELIFTIMSLKDKGSSQ
TETAVLSQIRIIEQIPLTIDTSRDILLRVRNLASEFAKDIKPSSEDKKIIVNYLFGLLSN
RFQPCWKAVYEALPLIANVCRQEIWQIAYFLLTKDYNNQIRNDIGQEEFMDVESTLVEWQ
PRNTRLYNNFAHFENSHMKTFRNVDGSIVEICQNSVNENTFNSFLKSNVLSALKAVPQVI
DASRLVSLVVHGKTDDEQEQDWSRSDRNELLAVLAQTKNLKKLDAADELFQYMKTLLAST
FSKTQQLALNVIFAYNNPVINKYRDKLKNLLDDVTFSDEIITFTTSNSTIEDIDRPIIMP
LVVRILFGKVQGKPKSNSKQGNKNAVVSFLPNFNNEDIISFISVGADKLDYANYFNKKIP
TISLGYDKSELRRMAGFINLVQQMYEVLSKNYADVLAWTIKPLVYSLISAQNRLDVSSSN
SNGEVYADAVENENDNEDEQISNANIDHEDREDDKIVTDKIAKSIRSSGMRCLKELFVIL
GPEYDWSGYVDLISEYLIAPRLPNFSTENLQQPSATLTLMSSWINQPNTIPFLYANDFAA
VNALLSILGNDHAKESVSKEVLGFAVKALEKKSETNDEFFTLLAIIVDSLLQTLPSTIKR
IYNPEVGSLAIRTLLLMIQGEYIDNKETQQTLIQALTFALEKSNSHIDLKDKANVLIALS
SLLMNYDCEFGEVEQLYQVCSKLLRVFAAREIRETLATLFETFGLKFQRHLLQVGNLIVG
LNAYTSRMNEYDFQKRLGAFKLINEDLYLTFDAVQWSPLINCALFFINDQEELSMRSNAG
YMIKRFVDCLISQPSAEDAVPFVHMLKDTVLPILRLGIRKTNEDVQNEYILVLEYIVRQS
TDYFTDMRDMQILLGEDNQDYEKDEKDNNVEKMKVGQEVEEDEALEDESRFFQNITSIQL
HLRYRAIKYLMKVSNQLKENSISHYILPIIEAYVLTKEEKYRNIGLIALESISVLARSVT
WSQYKAIFKRYLSNLKSSQEQLKPKVNLVVAVSSVLKESVANRNEGIKNLPSQDEIDLFI
LNEVSPALVKIIQVRDDDTIVARAPLAEAAINLTLCLSPDKIEGELPKILTSMCQVLRSR
SEELREAIRKSLGKIAIALGARYLPFIIKELKTALSRGSQIHVLSYTVHYLLQSMAQVGL
QHGDLNESISLIMDVVMEDIFGAAGQEKDADGYTSKMKEVKFKKSFDSCEIVSSNISLSH
FGELIEPIKLLLQEVVNHKVQVKLDELLRRLSLGLNHNIEASKLEILHLCYEIFLMSSEP
ERRNVEPTMSASEAHFMTTLNRKKIKNHVDKSLYRQTMQRLSFELLRTAISRHDNLLNTA
NLKGFVPLLEEGMNANNENVILISLRVLTIIIRLPFDDETQGLLKTCARRALVLIKDSPT
TNSDVCQAALKFLATTLKHNKKVELKESAISYVLTKIQPDLEEPNRQGLAFQFLKAVVSQ
HLLLPELYDLMDNVAKLMVVNHSKEIRDMSRAVFFQFLMEYDQSKGRLEKQFKFLVNNLT
YPTEEGRQSVMELIHLIIAKAGPDLISKLGSSFFITLANVLVSDDSAKSREMANVLLSSL
VKKLPNIGFVEEYCSVWLKQSSNMLLKRCGLNVYKMLISVFGVDKNKELDKVAVGNIQTI
LNSAKNTEEGGSAEWELVYSALSAFSSMASSAKDSIFDHKYKTIWSSIVDCLLFPHSWIR
LITCRLVAIELSNLNKSKLDTIELELIAGRLTHQLRTPSISEDLANQCIKNLVMIAMHWE
TSNTMLQQSRETEEKEVLANDYLVGRICSIVKQENVQSIVAKKAAIKFLALFIQLTKEDK
VEKVAETIISSLYNFTDPVYSSSLDSEELLNISLETLNMVKAKIGVTEYTQIYAQVQKAV
NIRRSSRKAKRSQMAVTAPDVANRRKTKKHERSREKRRHERDENGYYKPKKRRAM
NT seq
7728 nt
NT seq
+upstream
nt +downstream
nt
atggcggtaaaggtcaaatctacggaatcaagtagacggcatgcgttcaagtcatttcga
gaaagggtcgactcgataaaaatcgaacccagcagaagactcgagaaaagagttcacgat
gaggtagaatcttcacacttgttgacgacacttgaacactggaaagaactcaacctatca
aaagtatttacagagctagtcgatagtatagaggagttgtgtcagtcattaccgcaggtc
ttgcactaccagctacgaatatttgaagcaatctacaatgccataaaacaaaatgatgta
cattccttacaacctagcttggaactacttacccagtttatccacgatttgggtccagat
tttttggcctactacttaaaaacactccacttgttgagtgaagttgcattagctcaaaat
ccaaatgattttcaaaacaatagaaactcttcaaatgcattggactggatatttaatgcg
cttgcatttgctttcaaatatttggtgagataccttgttgaagatttgaagcctactttc
caagagttggctccattgttgaaattgaaaaagcaaacgtacatttcacgattttgtgcg
gagtcgttatcgtacttgatcaggaaactgggatccaaatcccttaacgaaattgtcgag
ttttcccttgagagtcaggtacaagatgttattgataatgacaactactgtgagtcttta
aagatcatgtatagtgagtcgatgaagaatacaaccggtaccttccatacaaaggcaaag
gcgatcttatcaagcattttgaattgtatagttttcaagaacgatcaacgcctttcactg
cagcaggagcagctgcagcagcagcagcaacaacaacaattgcaacaacaaaaagaagct
gtgcagccaaaacttaccagtttgctctcagatattctccttgatgtcttgcatcacggt
gaacaggaagcttgtgccaagttttacgaaatggttacattgtctttgcaagagctttta
gaaaaaaatccaaaatgcacactttcgcttcttgtgtcatgccagatcctttcaactttg
agttttgcagactcaggaagaaaagtttccgattggagttgtgtgcttacaacagtggat
aaaataataactaaactcaacctgatacagctgctaccaagagaactcactgagtccttt
gtgtatttgttggtcattactttcagaaatgccgactcacaggcattaatcaagtaccaa
aaacgattttttcaagtaatgattacgatcaatgaaggtaatgattttctattatttgca
gagtctgcacttgcagttgcgggctcaaaagtggaaaaatttgcaattgggaaacacatt
caggattacataaaccgggcagtggactctgcagacaaaatgaaacgggtcattttgttt
ttgaaccatgctggaaaacaaaatcttatcaaacaaacttttactataccttctaaatca
gttgagaaactatccattgcagctacagctgacattgattcgaaaagttattacgatttg
tactggaagcttttgattttcaattatgccaaaacttgtcaaattaatgttgatttattg
acccaaacgctttttgaacttccagatgatgttttgggaagagaactggcctcaatgatt
ttaagtattttgtacaggaaaatcagtgaacaaaccgaaattgaaaaaaagggtgaaact
ttaagttcaaatgaaaacgtttgcagaatactagcataccttgatcaagactttgttaga
ttgaatcaatcctcaagtttcctcaagactatgaatgattttgtcaagtttgcaactgac
cctcaagtgtttttacagcgtgctttggactgtttgtatttgcccagccatgaaacgagg
gaaaatgctattgagttgatctttaccataatgtctttgaaagataaaggttctctgcaa
actgaaaccgcggttctttcacaaatcagaattatcgagcaaattccattaactattgat
acgagtagagatattttattacgagtgaggaatttagcttctgaatttgctaaggatatc
aaaccttcttctgaggacaagaaaatcatcgtaaactatttgtttggattattgtcaaat
aggtttcagccatgttggaaagcggtctatgaagcattgccccttattgcgaatgtttgt
cgacaagaaatatggcaaattgcttatttcttactaacaaaagattataacaatcaaata
cgcaacgatattggtcaagaagagtttatggacgttgaaagcactttggttgagtggcag
ccgagaaatacaagactttataacaactttgcgcactttgaaaatctgcacatgaaaact
tttcgcaatgttgatggttcaatagtagagatttgccaaaactcagttaatgaaaacacc
tttaattcgtttttgaaatcaaacgtgttgtcagctttgaaagctgtgccccaagtgata
gatgcatcgaggttggtgctgttggtggtacatggaaaaactgatgacgagcaagagcaa
gattggctgagatcagatcgaaatgagttgttagctgtacttgctcaaactaaaaatttg
aaaaagctcgatgctgccgacgaattgttccaatacatgaaaactcttttggctagtaca
ttttctaaaacacaacagttggcattgaatgtgatatttgcatacaataatccagttatc
aacaagtacagagacaagttgaaaaacttgttggatgacgtcacatttagcgatgaaata
atcacattcaccacatccaactctacaattgaggatatagacagacctattataatgccg
cttgttgttcgtatcttgtttggtaaagttcaaggaaaaccaaaaagcaatagtaaacaa
ggaaacaaaaatgctgtggtatcgtttttgccaaacttcaataatgaagacatcatatca
tttatatctgttggtgcagataaactcgattatgccaattactttaataaaaaaataccc
acaataagcttggggtatgacaaatctgaactaagaaggatggctggttttatcaatctt
gtgcagcaaatgtacgaggtgttgagtaaaaactatgccgatgtattggcatggaccatc
aagccattggtttattcattaatatctgctcaaaacagattggacgtttcttctagcaat
agcaatggcgaggtttatgctgatgccgtggaaaacgaaaacgacaatgaagatgaacag
atttcaaatgctaatattgatcatgaagatcgcgaagatgacaaaattgttacggacaaa
attgccaagagcattaggctgagcggaatgagatgtttaaaagagctttttgttattctt
ggccccgagtatgattggagtggatacgttgacttgatcagcgaataccttatagcccct
agattgccaaatttctccaccgagaacttacagcaaccgctggctactttaactttgatg
agctcgtggatcaaccaaccaaacacaattcctttcttgtatgctaatgattttgctgct
gttaatgctttattatccatattgggcaatgaccatgccaaggaaagtgtatcaaaggag
gttcttggctttgctgttaaggcgttggaaaaaaaatcagagaccaatgatgaattcttt
acccttttagcgattattgtcgactccttgcttcaaacattaccttcaacaattaaacgt
atttacaatccagaggttgggtctttggctatacggactcttctcttgatgattcaaggc
gaatatattgataataaagagacccaacagacacttatccaggctttgacgtttgccttg
gaaaagagtaacctgcatatcgatttgaaagacaaggcaaatgtgttgattgcattatct
tcgttgttgatgaattatgattgtgaatttggagaggttgaacaattatatcaagtttgt
tcaaaacttttgagagtatttgcagcaagggaaattcgtgaaacacttgctaccttattt
gaaacttttggtttaaagtttcaaagacatttgctacaggtgggaaacttgattgttgga
ctcaatgcctatacctcgagaatgaatgagtacgatttccaaaaaagattgggagctttt
aagttgatcaatgaagatttgtacttgacatttgatgctgttcaatggtctccgttgatc
aattgtgcattattttttatcaatgatcaggaagagttgtctatgagaagcaatgcaggt
tatatgataaaacgttttgttgattgtctcatttcgcaaccatctgcagaagatgcagta
ccgtttgtacatatgttgaaggataccgtgttgccaattttgagactcggtatcagaaag
accaacgaagatgttcaaaacgaatatattttggtattggaatacattgtgagacaaagc
acagactacttcactgacatgagagacatgcaaatacttcttggtgaagataatcaagat
tatgaaaaagatgaaaaagataataacgttgagaaaatgaaagttggccaagaagttgaa
gaagatgaggcattagaagacgaactgagattctttcaaaatataaccagtattcaatta
catttgcgatacagggcaatcaagtatttaatgaaagtcagcaaccagctaaaagagaat
agtatctcgcattacatattgcccatcattgaggcgtatgttcttacgaaggaagagaag
tatagaaatataggattgattgctttagagtcgatttctgtcttggccagatccgtgaca
tggagtcagtacaaggctattttcaagagatatttgagtaacctaaaatctagtcaagag
caattaaagccgaaagtgaatttggtggttgccgtttcaagcgttttaaaagaatcggtt
gcaaacagaaacgaagggatcaagaatttgccctctcaagacgaaattgacttgtttatt
ttgaatgaagtatctccggcacttgtcaaaatcattcaggtgcgtgatgatgatacaatt
gtagcacgtgctccacttgccgaggctgccattaatttgacattatgtttgtcacctgac
aagatcgaaggcgagctccccaagattttaaccagtatgtgtcaagtcttgcgttcaaga
tcagaagaattgagagaagctattaggaaaagtttgggcaaaattgcaattgcacttggg
gcacgttatttgccgttcattataaaagaattgaaaactgcattgtcaaggggttcgcaa
atacacgttttgagttatactgtacactacttgttgcaaagtatggcacaagttgggtta
cagcacggtgatttaaacgagtctattagtttgattatggatgtggttatggaggacatt
tttggagcagctgggcaagagaaagacgccgatggttataccagtaaaatgaaagaggtg
aagttcaagaaaagttttgactcatgtgaaatagtctcttctaatatatctttgagccat
tttggagagcttatcgaaccgataaaattgctacttcaagaagtcgtcaatcataaagtt
caagtcaaattggatgagcttcttagacgtttgtcgttgggattaaaccacaacattgag
gcatccaaattagaaatattacacttgtgttatgagatctttttaatgtcatcagagcca
gaaagaagaaatgttgagccaaccatgagtgcatctgaggcgcatttcatgacgactttg
aatagaaagaagataaaaaatcatgtggataaatctttatacagacaaaccatgcagcgg
ctttcttttgaattgcttaggactgcgatttcacgtcatgacaatttgctaaatacggca
aacttgaaaggatttgttccgttgcttgaagagggtatgaatgcaaataatgaaaatgtt
atcctaatctcattgagagtattaactattattattcgtttgccctttgatgatgaaact
caaggactattaaaaacatgtgcgagaagagcattggttttgattaaggactcaccaact
acaaattcagatgtttgccaggcagctttgaaatttttagccacgacgttgaaacacaac
aagaaagttgaattaaaagaatcggcaatcagttatgttttgaccaaaattcagcctgac
cttgaagaaccaaacagacaagggttggcattccagtttttgaaagctgtggtttctcaa
catttgttgcttcctgagctatatgatttgatggataatgttgctaaattgatggttgtc
aatcattccaaggaaattcgtgatatgtcaagagcagtgtttttccaattccttatggag
tatgaccaaagtaaaggaaggttggagaaacaatttaaatttctagtcaataatttgaca
tatccaacagaagaaggtcgtcaatctgtgatggagttgattcacttgattattgccaaa
gctggtcctgatcttatctccaagttaggttcctcatttttcatcactttggcaaatgtc
ctcgtttccgatgactcggccaaatcaagagaaatggcgaacgtgttgttatcttcttta
gttaagaaattgcccaacattggatttgttgaggaatattgttcggtttggttaaagcaa
tcttctaacatgttattgaagaggtgtggtctaaacgtttacaaaatgctcatttcggtt
tttggagtcgataagaataaagagcttgataaagttgctgtgggaaatatccaaaccatt
ttaaattctgcaaagaatactgaagaaggtggaagtgcagaatgggaacttgtttatagt
gctttgagtgcatttagttccatggcatcatcagccaaggactcgatatttgaccataaa
tacaagacaatttggtcgagtattgtggattgtttactatttccacattcatggatcagg
ttaatcacttgtcgattggttgctattgagttgtccaatttgaataagagcaaacttgac
actattgagttggagttgattgcaggaaggttgacccatcaacttcgaactccatccata
tcagaagacttggcaaaccagtgtatcaagaatttggtgatgattgcaatgcattgggag
acttccaatacgatgttgcaacagagtcgtgaaacagaagagaaagaagtgttggcaaat
gattacttggttggaagaatatgcagtattgttaaacaagagaatgttcaatccatcgtt
gccaaaaaagcggctatcaaatttttggcattatttatccagctcaccaaggaagacaaa
gtagagaaggtggctgaaactatcatatcatcattgtataattttactgatcctgtatac
tcgtcttcacttgatagtgaagagcttttgaacattagtttggaaacattgaacatggtc
aaggccaagattggagtcactgagtatacccagatatacgctcaagtacaaaaggctgtc
aatatacggaggctgtcaagaaaggcgaaacgttcgcaaatggctgttactgccccagac
gttgctaatagaagaaagactaaaaagcatgaaagaagtcgggaaaaaagaagacacgaa
cgtgacgaaaatgggtattacaaaccaaagaagcggagagctatgtag
DBGET
integrated database retrieval system
