Lodderomyces elongisporus: PVL30_002104
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Entry
PVL30_002104 CDS
T01116
Symbol
BMS1
Name
(RefSeq) Glycoside hydrolase 2 (Mannanase, beta-galactosidase)
KO
K14569
ribosome biogenesis protein BMS1
Organism
lel
Lodderomyces elongisporus
Pathway
lel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PVL30_002104 (BMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lel03009
]
PVL30_002104 (BMS1)
Ribosome biogenesis [BR:
lel03009
]
Eukaryotic type
90S particles
GTPase
PVL30_002104 (BMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
AAA
AAA_16
MMR_HSR1
AAA_22
AAA_28
RNA_helicase
AAA_33
ABC_tran
PduV-EutP
AAA_11
NTPase_1
Rad17
NPHP3_N
NB-ARC
AAA_5
AAA_19
nSTAND_NTPase5
AAA_18
MobB
AAA_25
Viral_helicase1
NACHT
AAA_7
RsgA_GTPase
AAA_29
AAA_14
Motif
Other DBs
NCBI-GeneID:
5233821
NCBI-ProteinID:
XP_001527302
UniProt:
A5DXP4
LinkDB
All DBs
Position
2:complement(2131523..2135191)
Genome browser
AA seq
1222 aa
AA seq
DB search
MDQQQSNKAHRGAAKRTGAKKKLHQNGNNAKAFAVSAPRKLERMARRSHDVNERKLHVPM
VDRTPDDDPPPVIVAVMGPPGTGKSTLIKSLIRRLTKTTLTEIKGPITVVSGKRRRLTFI
EVNNDLNSMIDIAKVADLVLMLIDGNYGLEMETMEFLNIAQHHGMPRVLGVATHLDLFKS
QSTLRTSKKRLKHRFWTEVYQGAKLFYLSGVINGRYPDREILNLSRFISVMKFRPLKWRN
EHPYLMGDRITDLTHPQTIAENPKCDRKVAIYGYLHGTPLPASNAQVHIAGVGDYSVSAI
EKLPDPCPTPYFEQKLEELERERMKAAAESGEPLAKTTRRRKRLDDKQKIIYAPMSDVGG
VLVDKDAVYIDVGKESFNPENNEDGELKGEGETMVTNLQEAAKTMAERFEDGPGLQLFSD
SKAIRNASEDDEEDDEEDDEDSLSDDEETLVDTGRKSMRHARLYGKSVSEDDEFDDAESD
EEDDENDINGDNFDLEGRPRFEEIDFKIENGPKYNQKELEYVEDSALSSDDDDVYGENGS
SYRSTASRLRGSGKRRWDINKLLYMTNIEPSDALQRWRGEVSNDDDDNDEEEDIKQDDDE
LFFKKKEVRNADADPDTSKPQFAPLDELKKKFAKNDDDSNSDEEYESGYQLLKKRLLVAP
KLNVEGEEDGTNDGATTAAADGEDEDEVYGDFEDLEEGEESGRNIEGHGKSMNLAEVGDE
DKDDFANFEEEERKEEQGLDDEDMENLSVEERRRLNAIKKAQLKTQFEEEEDREFGADDP
EGDTEAETWYEFQKNKMAKQLEVNKAQYSEMDEQQRIQIEGYKAGSYVKIVFDKLPCEFV
ENFNPEFPLVLGGLLSTESRFGIMNTRIRRHRWHKKILKSQDPLILSLGWRRFQTLPIYT
TSDSRTRNRMLKYTPEHAYCFASFYGPLVAPNTTFVGFNIVDSSSTTGAFRVAATGIVED
INSSVEIVKKLKLVGHPYKIYRNTAFVKDMFSNALEVAKFEGAQIRTVSGIRGEIKRALS
KPDGCFRATFEDKVLMSDTIFLKTWYPIKIKKFYNPVTSLLLNHHSEWKGMRLTGMVRAE
NNIPTPLQSDSQYKKVERTERHFNPLRVPKSIRSDLPFKSQIHEMKPQKKQTYMSKRAVV
LGGEEKKARELMQKIATIRKEKDVKRKAKKGEKFKEKLKKIAKTEELRKEKERERKKEYF
AKEGKKRKVSSTDSAGGKRRRT
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcaacaatcaaacaaggcccataggggagcggcgaaacgaactggagcaaag
aagaaacttcatcagaatggtaataatgcaaaggcttttgctgtgtctgctccaaggaaa
ttggaacgaatggcaaggaggtcgcacgatgttaacgaaaggaaattgcatgtgccaatg
gtggatagaactccggacgatgacccaccaccagtgattgtggcagtcatgggcccacca
ggtacaggtaaatccactttgatcaaatcgcttattagacgactaacaaagactacattg
acggagatcaaaggtcccatcaccgtggtgagcggtaaacgaagacgtttgacctttatt
gaggttaataacgatttgaactccatgattgatatcgcgaaagtagctgaccttgttctt
atgttgattgatggaaattatggtttggagatggagactatggagtttttgaatatcgcc
cagcatcacggtatgccaagagtgcttggtgttgcaacgcatttggatttgttcaaatca
caatctacattgagaacatcgaagaagagattgaaacacagattttggaccgaggtatat
caaggagctaaattgttctacctttcaggtgttatcaatggccgttacccagatagagaa
atcttgaacttgagtagattcatttccgtgatgaagtttagaccgttgaagtggagaaac
gagcacccatacttaatgggtgaccgtatcactgacttgacacatccgcaaacaattgca
gaaaacccaaaatgcgatcgtaaagtggcaatttatggctatttacatggaacaccatta
ccagcatcgaatgctcaagtgcacattgcaggtgttggggattacctggtttctgccatc
gaaaaacttcctgatccatgtccaacaccttatttcgagcaaaaattggaagagttggag
agagagcggatgaaagctgccgccgagctgggagaacctttagcaaagacaactagacga
agaaaaaggttggacgacaagcaaaaaattatttatgcaccaatgtcggacgtaggcggt
gttttagtggacaaggatgctgtctatattgatgttgggaaggaaagttttaaccctgag
aacaacgaggatggagaattgaaaggcgaaggagagactatggtgaccaatttgcaagag
gcggccaaaaccatggccgaaagattcgaagatgggcccggattacaattattctctgat
tccaaggctataagaaatgctctggaagacgatgaagaagacgatgaagaagacgacgaa
gactcattgtctgatgatgaggaaacccttgtggatacagggaggaaatcaatgaggcat
gcaagattgtatggaaaatctgtttcagaagatgacgaatttgatgatgctgagtcggac
gaggaagatgacgaaaatgatatcaatggagacaattttgacctcgaaggaaggccaagg
tttgaagaaattgatttcaagattgagaatggaccaaaatacaatcagaaggagttggag
tacgtcgaagattctgctctttcatcggatgacgacgatgtttacggagaaaatggttct
agttataggtccactgctctgagattgagaggttcgggcaaaaggcggtgggatatcaat
aaattgttgtatatgacaaatatcgagccactggatgcactccagagatggaggggcgag
gtgagtaatgacgacgacgacaatgacgaagaagaagatatcaaacaagacgacgacgag
ttgttcttcaaaaagaaagaggtcagaaatgccgatgctgaccctgatacactgaagccc
caatttgcaccacttgatgagttgaaaaagaagtttgctaaaaacgatgatgacagcaat
agtgacgaagagtatgagagtgggtaccagttacttaagaagcgtttgttggtggcacct
aaactaaacgtcgagggggaagaagatggtacaaatgatggtgcaacaacagcagcggct
gatggtgaggatgaagacgaagtatatggggattttgaggatttggaagaaggagaagaa
tctggtcgtaacatagaaggtcatggtaaaagtatgaacctcgctgaagtaggcgatgaa
gataaagatgactttgccaatttcgaagaagaagagcgcaaggaggagcaaggattggat
gacgaagatatggaaaatttgagtgttgaagaaagacgtaggttgaatgcaattaaaaaa
gcacagttgaagactcaattcgaagaagaagaagaccgagaatttggtgctgatgaccct
gaaggggacactgaggccgagacgtggtatgaatttcaaaagaataaaatggcgaaacag
ttggaagttaataaggcacaatacagcgaaatggatgaacagcagcgtatccagattgaa
ggttacaaggcaggatcttatgtcaagattgtgtttgacaaattaccatgtgagtttgtt
gaaaatttcaacccagagttcccacttgtgctcggtggtttattatccaccgagtcgagg
tttggaattatgaataccagaatcaggagacacagatggcacaaaaaaatcttaaagtcc
caagatccgttgattttatcacttggttggcgtcgtttccaaacattaccaatttacacc
acatcagattcgagaacaagaaatagaatgttaaagtatacacccgagcacgcatattgt
tttgcatcattctatggtccgttggttgctccaaacacaacatttgttggattcaatatt
gttgacagtagttcaaccacaggagctttcagagtagcggccactggtattgttgaagat
atcaactcttcagttgagatcgtgaagaaattgaaattggtgggtcacccttacaaaata
tatagaaacactgcttttgtcaaggatatgttttccaatgcattggaagtggccaaattt
gaaggtgctcaaataagaacggtgagtggaataagaggtgaaatcaagagagctttgtcg
aaacccgatggatgctttagagctacttttgaagataaagtattgatgtcggatacaatc
tttttgaaaacttggtacccaatcaagattaagaaattctacaatccagtcacttcgttg
cttctcaatcaccattcagaatggaagggaatgaggttaactggtatggtcagggcagag
aacaacatccctacaccattacaaagcgactctcagtataagaaagtcgagagaaccgaa
agacatttcaacccgctcagagtgcctaaatctataagaagcgatttaccattcaagtca
caaattcatgagatgaaaccacaaaagaagcaaacgtatatgagcaagcgagctgttgtt
ttgggtggcgaggagaagaaagctagggagttaatgcaaaagattgccacgattagaaag
gaaaaagatgtaaagagaaaagctaaaaagggtgaaaagtttaaagaaaaattaaaaaag
attgccaaaaccgaagagcttcgaaaagagaaggaaagggagaggaagaaagaatatttt
gcaaaagaaggcaagaaaagaaaagtgtcttctaccgacagtgcaggtggcaagagaaga
agaacataa
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integrated database retrieval system
