KEGG   Lodderomyces elongisporus: PVL30_002113
Entry
PVL30_002113      CDS       T01116                                 
Name
(RefSeq) uncharacterized protein
  KO
K10570  DNA excision repair protein ERCC-8
Organism
lel  Lodderomyces elongisporus
Pathway
lel03420  Nucleotide excision repair
lel04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:lel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PVL30_002113
  09124 Replication and repair
   03420 Nucleotide excision repair
    PVL30_002113
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lel04121]
    PVL30_002113
   03400 DNA repair and recombination proteins [BR:lel03400]
    PVL30_002113
Ubiquitin system [BR:lel04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     PVL30_002113
DNA repair and recombination proteins [BR:lel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PVL30_002113
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EML_2 WDR55 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_Nup120_160 WD40_RFWD3 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 WD_LRWD1 KNTC1_N
Other DBs
NCBI-GeneID: 5234489
NCBI-ProteinID: XP_001527310
UniProt: A5DXQ2
LinkDB
Position
2:complement(2158694..2160067)
AA seq 457 aa
MQSLILQRRTGVISPLEFSRTLADKNYQSQLFQTAKYNVFPMNAHHNASVNALSMDSDEN
RFLLSGCGDSSIKIWDTNEQEKIREENEIDLSKMNHPAKYDLFDYDNPVSVFKNMATVPR
KTEHQFGVSAIQWWPYDTGMFVSSSFDHTIKVWDTNELCSVHTFNLNNRVYSVDLNGPKS
LVAAASDQPFIRILDVRSTSSAHTLKGHKGKTLSVKWHPLNEHLLASGGYDGQAKIWDIR
RSENLLCSLDMHHTNKQANTTFGLKKTTSTSISAPASAKAHSGPVNGLSWDESGTTLYTA
GNDDKIRVWDMVGSSYPPVNKLINFGPLTRNKYTQTIPILLNPMGETNLQYLLFPSESGE
ILVHRTIDGKLVNRLGRKGSKNIGRTCSMCNGGPNTGSYICGTVDGELICWQVFSDYIDL
SEIFEERKEEEEDVERLLLKKHTLALKAKNLMKSLEV
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgcaatctctaatactacaaaggagaacaggcgttatttcgcctcttgagttttcacga
acattggccgataaaaactatcaatcccaattgtttcaaacggcaaaatacaatgttttc
cccatgaatgcgcaccataatgcactggtgaatgccctatcgatggattcagatgaaaat
aggtttctccttagcggatgcggtgattcgagtataaaaatatgggacacgaacgagcaa
gagaagattagagaagagaatgaaatcgatttgagcaaaatgaatcatccggcaaagtat
gatttgtttgactatgataaccccgtttctgtctttaagaacatggcaacagtgccacgg
aaaaccgagcatcaatttggagtttcggcgattcaatggtggccctacgataccggtatg
tttgtctcatcttcctttgaccacaccataaaggtttgggatacaaatgagctttgttca
gttcatactttcaacctcaacaacagagtttactcagtcgaccttaatggaccgaaatca
ctagttgctgcagcgagtgaccagccatttattagaatcttggatgtgaggtctacttcg
agtgcacatactctcaagggacacaagggcaaaacactctcagtcaagtggcacccatta
aacgagcatctcttggcttctggtgggtacgacggtcaggccaagatttgggatattcga
cggagcgaaaacctattgtgcctgttagacatgcatcatacaaacaaacaggcaaataca
acctttggtttaaaaaaaaccacatcgacatcaatatctgcacctgcttctgcaaaagcg
catctgggacctgttaatgggctttcttgggatgagctgggtacaacattatacacggct
ggtaacgatgacaagatccgagtttgggatatggtagggtcctcttatccaccagtgaac
aaacttatcaactttggacctttgactcgcaacaagtatacgcaaacaatacccatacta
ttgaacccaatgggcgaaaccaatttgcaataccttctatttccatcagagagtggagaa
atcttagtccataggacaatcgatggtaagttggtcaataggttgggcagaaaagggtcc
aaaaatataggcagaacttgctcgatgtgcaatggaggtccaaacactggtagctatatt
tgtggcactgttgatggcgagttgatctgctggcaggtcttttccgactacatcgatctc
tcagaaatttttgaggaaagaaaggaagaggaagaagatgtagaaagattattactaaaa
aagcacactttagcacttaaagccaaaaatttgatgaagtcattggaggtttga

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