Lodderomyces elongisporus: PVL30_002218
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Entry
PVL30_002218 CDS
T01116
Symbol
RAV1
Name
(RefSeq) regulator of (H+)-ATPase in vacuolar membrane
KO
K24155
rabconnectin-3a
Organism
lel
Lodderomyces elongisporus
Pathway
lel04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PVL30_002218 (RAV1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_002218 (RAV1)
Membrane trafficking [BR:
lel04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
PVL30_002218 (RAV1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
PVL30_002218 (RAV1)
RAVE complex
PVL30_002218 (RAV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_EML_2
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
5233976
NCBI-ProteinID:
XP_001527362
UniProt:
A5DXV4
LinkDB
All DBs
Position
2:2472874..2477499
Genome browser
AA seq
1541 aa
AA seq
DB search
MTITFIPGEVNKSTGSVVQSNWKNHHVVIYGSGNNLIITSGTIQPTQRNPNPYNIDRSLQ
TIYLQKDPEAICFNSENGYIAIGYDNSCFIFKPMNEYMKIPKWVDALQFDIEIDSRITCL
DWASEESELAVGTEKQLLLYHISDSFGEFEASKRWEASQPNSIERLYITPNAKLILTTNS
VYDRLVKIWNRVSYGDDSTLFEVSYLPHPQGTFVKQFHWRRNQKTEVTQDKVLDSSMANI
KRIRGLLNRGNYGNEDNEVIYTLTSNKVLNVWASFESSGHDRISNWANLDLSNIFQNEEE
YINSFLVIEHRYLKSFTDYVKEELENQKQGQEQEQKNKSKLLFKIADVNLNDYDLILVIS
STGRVKIYAVSNISQSPPNNIKFTAINPDNYYEFKKSDFPSKTSLEYPSNLSVANIESRK
FINHYVNPVLVKCLCKLNNDERINTLSFLVHDRAKNTLRFEALNPTKILTSPSSKTFGVT
LLNKYQGHVKSIRKLVRSYSSYTSKNVILSISNFPSHNYIWEPLVYNENDSSIMSITRRF
RLDLGSQPVDGQRENAMWDAVIINDVERPNDYRRRHLVLVAEKSGNVSLWDCNGFDKHDQ
PVDRISILPALKKSPRAFAIAENNTNLNEDVKQYVVVAVYEKDSILAWNILIRYAGDEII
DIRLEAQSITDLPQDEHIHQVTKVDSFLTQSHKSLIAVIDKEGLLKSYRLKFAQSKTQQT
SGTLDWELTHTLFTNIKNADRISGSTVINKFAIINDNGYHLSIWDIDQNVLEYEEDYHQK
PQSKGPVVDLDWTFVNATMKEKSTANAILSVGFPRSVWLYTQLRYDYTNKIPTYAAIKEI
DISDYTSHQIGDSIWLDDGYLVIGCGNQFFIDDRWVKLGSGGVDSTIRQLMSGYITNGND
AKDQKQGIYNDGDEHYKNNKNNNSISGGGGSSSSIHVSNGVTNSVFNDTSEAKDNDDMVY
DISHLVRVLNGPLPVYHPQFLIQALFMGQTVTVQKILVSLFQALRHDDQVTWDLGIDFEK
EVDNSAMSLLDKSNSHGVTTLRRRLSQNFNLDVFTHFTAELADLLVKKLMTVSLPLLTRH
QQSTLISVTTIVKDLNKGAATLDENGMRFMMGFKLFQYSTKQKRMTMRDFNWALHSDSKE
VLLSSVEEYYSNKLSWESAKKTGLVYWVKYERLVKVIEAVVRNEFSELKNPGGIVSLLYL
ALRKKQVLIGLWRIVQHEEKTKMLKFLSNDFTDKRWKSAALKNAFVLLGKHRYYDAAYFF
LLGDEPIDCCNTIANKINDVQLAIAVAKVYSRTQERSSGGGGGVGGGVGGGDVGKADCLV
HIIEKYILPTAIENGDRWTSSWVFWQIHDKPLSIQALIKTPIEMVIENMSKFPNTSANEV
TPKGLSFLQDDPVLIILFNDLRSRNINYLKGSSRLSPNEEFQFVIKVAMIYTRMGCDYLA
LLLLKHWTFSVPQANQQKQPSSPISEKQGGFESINFNGQVHDGINRDGSNQEWGNNNTNG
IMQPSILDSYTNDQQYSVNNKKAPPAQAFEEPDMSSFSFGF
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcacatttatccctggcgaagtcaacaagagtacaggctcagtagtacagtca
aattggaagaatcatcatgtcgtaatatacgggctgggaaataatctcataattacatcg
ggcacaatccagcctactcaaaggaaccccaatccttataacatagatagaagtttacaa
actatatatctacaaaaggacccagaggcgatttgtttcaacagtgaaaatggatacatt
gcaattggttacgataactcctgctttattttcaaacccatgaatgagtatatgaagatt
cctaaatgggttgatgcacttcagtttgatattgaaatagattcgagaatcacctgtctt
gattgggctagtgaagaatctgaacttgcagttgggactgaaaaacagttgctcttgtac
catataagtgatagttttggagagtttgaggcaagcaaacgatgggaagcatcgcaacca
aactcaatagaacgactatacattacgccaaatgcaaagctcatattaaccacaaactct
gtgtacgatcgcctagtgaagatttggaatagggtgagctacggtgacgattcaacttta
tttgaagtatcgtacctaccgcatcctcaagggacatttgtgaaacaatttcattggagg
cgaaatcaaaaaacagaagtaacacaggataaggttttggactcttccatggcaaacata
aaaagaatacgcggccttctcaatcgaggaaactatggtaatgaagataacgaggttata
tatacattaacatcaaacaaggtgttgaatgtttgggcgtcatttgaatcaagtgggcac
gatagaataagcaattgggccaatctcgacttgtccaatattttccaaaatgaggaggag
tatataaacagctttttggtaattgagcaccggtatttgaaaagctttacagattatgtt
aaagaagaacttgaaaatcaaaaacaagggcaagagcaagagcaaaagaacaaaagcaaa
ttattgttcaaaatcgcagatgtcaatttgaatgactacgatttgattttggtaatctca
agtactggacgtgtcaagatctatgcggtttcaaatatatcgcaatcgccccccaataac
atcaagtttacagccattaatcccgataactattacgaatttaaaaaaagtgactttcca
tcaaagacctctttggagtatccatccaatcttagtgtggcaaacatcgaatccagaaag
tttatcaatcattacgtgaatcctgtgttggtcaagtgcttgtgcaagttaaacaatgac
gaaagaataaacactctttcctttttagttcacgatagagctaaaaacacactaagattt
gaagctttaaatccaacaaaaattcttacttcaccactgtccaaaacatttggtgtaaca
ttattaaacaagtatcaaggacacgtcaaatctataagaaagctcgttagatcatattca
tcctatacatcaaaaaatgtaattctttccatatcgaattttcccagtcacaactacata
tgggagccacttgtttacaacgaaaacgacagcagtataatgtccattactagacgattt
agactagatttgggttcacaaccggttgatggtcaaagagagaatgcgatgtgggatgct
gttataatcaatgatgtcgagcgaccaaatgattatcgaaggcggcatcttgtccttgtt
gctgaaaagagtggaaacgttagcttgtgggactgtaacgggtttgataaacatgaccaa
cctgtggatcgcatctcgatattaccggcattgaaaaagagtcctcgagcttttgcaatt
gctgagaataacactaatttaaatgaagatgtaaagcaatacgttgttgttgctgtgtac
gaaaaagattctatacttgcgtggaacattttaataagatatgccggtgatgaaattatt
gacatcagattggaagcgcaatcaatcaccgatttaccgcaagacgaacacatccatcaa
gtgacaaaagttgactcgtttcttactcagtcacataaaagcttgattgccgttatagac
aaggagggactattgaaaagctatagattaaagtttgctcaatcaaagactcaacaaact
tccgggacccttgattgggaacttacacacacgttatttacgaatatcaaaaatgctgat
cgtataagtggctcaacagttattaataaatttgccattattaatgacaatgggtaccat
ctttcaatttgggacattgaccaaaatgtccttgagtatgaagaagattatcaccaaaaa
ccccaaagtaagggaccggtcgttgacttggactggacgtttgtaaatgctacaatgaaa
gaaaagctgacagcaaatgctattctatcggtagggtttccccgcagtgtctggctctat
acccaattgaggtatgattatacaaacaaaattccaacttatgccgcaataaaagagatt
gacatttcagactatacgtcacatcagattggcgatctgatatggcttgatgacgggtat
ttggtcattgggtgcgggaatcagttttttattgatgatcgatgggtgaagttgggttct
ggtggtgttgactccaccatccgtcaattgatgagtggttatatcaccaacggaaatgat
gcaaaggatcagaaacaaggtatctacaatgatggagatgaacattataagaataataag
aataataatagtattagcggtggtggtggtagtagtagtagtattcatgtttcaaatggt
gtcaccaatagtgttttcaacgataccagtgaagctaaagataatgacgacatggtttat
gatatctcgcatttggtgcgtgtattgaatggaccacttccggtgtaccacccacagttt
ttgattcaagcattatttatgggccaaacagtaacagttcagaaaatcttggttagccta
tttcaagccttgcgtcatgacgaccaagtaacttgggatttgggaattgattttgaaaaa
gaggttgataatagtgcaatgtctttactcgacaagagcaactcccatggtgttaccaca
ttgcgcagacgcttatctcaaaacttcaaccttgatgtatttactcactttactgccgaa
ttggcggatttattagtaaagaaacttatgacagtctcgttgccattgttaacacgacat
caacagagtacgttgatttcagtaacgacgattgtgaaagatttgaacaaaggcgcagca
acattggatgagaatgggatgcgattcatgatgggattcaaattgtttcaatattcaacc
aaacaaaagcgcatgacaatgcgagattttaattgggccttgcattctgacagtaaagag
gtgttgttgtcctcagttgaagaatactattcaaacaaattatcgtgggagagtgccaag
aaaacaggcttagtttactgggtaaagtatgaaagattggtgaaagttattgaagcagta
gttcgaaatgagtttagtgaattgaaaaaccccgggggtatcgtgtcgttgttgtacttg
gctttgagaaagaagcaggtcctcattggactttggagaattgttcagcacgaagaaaag
accaagatgttgaagtttctcagcaatgattttactgataagagatggaagtccgctgcc
ttgaagaatgcatttgtattgttgggaaagcaccggtactacgatgctgcgtattttttc
ttactcggagacgaaccgattgactgttgcaacactattgctaacaaaatcaatgatgtg
cagttggccattgctgttgccaaagtgtactcgcggacgcaagagaggagtagtggtggt
ggtggtggtgtcggtggtggtgttggtggtggtgatgttggcaaggccgattgtttagtg
cacattattgaaaaatatatactacccaccgcaattgagaatggagataggtggacaagt
agttgggttttttggcagattcatgacaaaccactatccatccaagcattaatcaaaacg
ccaattgagatggttattgaaaacatgtctaaatttccaaatacatctgcaaatgaggtg
acaccaaagggactcagtttccttcaagatgatccggtattgataatattgtttaatgat
ttgcgtctgcgcaatataaattatttaaaaggttcatcacgtctttcaccaaacgaagag
tttcagtttgtgataaaagtggcaatgatatatacaagaatgggatgtgactaccttgca
ttattgcttttgaagcactggacattctcagtaccacaagctaaccagcaaaagcaacct
ctgctgccaataagcgagaagcaaggtgggtttgaatcaataaactttaatgggcaagtg
cacgatggaataaatcgtgacggttccaaccaagaatggggcaacaacaatactaatggc
attatgcagccaagtatattggattcatacaccaatgatcagcagtattcagtcaataat
aaaaaggcccctccagcacaagcatttgaagagccagatatgagctccttcagttttggg
ttttga
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integrated database retrieval system
