Lodderomyces elongisporus: PVL30_002225
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Entry
PVL30_002225 CDS
T01116
Symbol
VPS8
Name
(RefSeq) Vacuolar protein sorting-associated protein 8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lel
Lodderomyces elongisporus
Pathway
lel04138
Autophagy - yeast
lel04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
PVL30_002225 (VPS8)
04148 Efferocytosis
PVL30_002225 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_002225 (VPS8)
Membrane trafficking [BR:
lel04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
PVL30_002225 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
TPR_VPS8_2
Beta-prop_VPS8
zf_RING_Vps8_fungal
WD40
zf_RING_Vps8
WD40_WDHD1_1st
zf-RING_2
zf-rbx1
Beta-prop_HPS5
WD40_CDC20-Fz
Autoind_synth
Motif
Other DBs
NCBI-GeneID:
5233891
NCBI-ProteinID:
XP_001527370
UniProt:
A5DXW2
LinkDB
All DBs
Position
2:complement(2497965..2502341)
Genome browser
AA seq
1458 aa
AA seq
DB search
MTISEQKSNLYRKSSSSTRSPSSSISSSFTTINGLPRSRFDDRATTKTSLALQEYKKTSF
NNEKKTQWSDEQAALSSMFKWSPLSKINHIIESSSFISERGTVSQVVSNSIYIAVSTSKS
IVVIFNYKQSIEAILNDESNKASKSGQGQGQGQGQGQESTREIRRDPRHELDNDPHFFPT
SSRASPFSATVEFTKTAPKGKISAMAFSSDSSFFVAGYENGSICVWDLNSNRSRSLPSVI
RPFFTIYPKLPRARSEIEGHAINTLIKSVRFLHPHNNQIMSIDASGLSLFHKISQKLMTR
YATSNRLCAKKVQMQAQLPLGSAYEITDEMGVISLLSNDDLMIISSTSLNDPEVINLRQQ
YTYNIRSNTSNQLSMSWFPCSKKPKGVDTEGGGKGVVNAKLACSWGNILHIIELDNEILP
SNLRQIVEDAKDKDRAVPKLPFKRTCKWHEASNIVDSKWISTDILCVFLLMEDTSGLQMK
TYYYDGSTLIPIAKDEICGDVQKVDLAKQSLLALKDARLYMGRQLSWADLILRKVSQSQY
QDALQLADEYYQTSSVGLLAAVGLPTSKDKRLKLLYPYFLDIMRASMPSLSKDFEPAKLH
IYFDVLTYAASDDILEELLESVDDDQVYFEVLEPYILFGTIKVLPPNVLKHLIKHYVSIG
EGELLTELLCTLDIKSLDIDLAIKLCTEYRLNDCLIYIWNMLLNDYQTPFFDFVQEYSSP
QFELTEQSAKAYTYMTYILTGRQYPTDRLISNNNNNDDDGGGGDDGGGGAKGAIRSVCDA
LFSHTAIRRDGTLVLTQDKDIVFPYLYLFLKRSSILMMSVLNEFFESSFLNENEKYNRQY
LLEVLIDLFRVNESSFTEFDKCQLAIFIARNYPKYFQLLRLPESILDTVINRLCSNTNAT
LSEDCELALCSLIPLYTPDDEMFVEKLKLSKFYNVLFDIFNAQGKYSRALEIWLMKRSKN
DGHDASGVNNRNTVGEEDDPCFAGDNSFTFETMNVLESALIKTQDVSEKLNVAKVIKSNF
EILVSLDWKRFLQLVNRYVPSMHTEILDINNDKIAFAYIKTLFSMHITDLDPFLYRYIQL
MIKEDRLNAVQFVEKWGEKIVRSSSRNQIEKVFNDFAFTEGNACLLENDKDHQGAVDCIL
AHLQRISKHLRKQDQRQRFTSLLSYCFAICENYGNSVNNKGDETHKSDKIAKSYEDVSGN
GKYNNENLHADEKLWLKIINFLVEMANTFTCGEEHLYFNQCVQNCFRRLSDYKLTTSDGE
QSFLAIFNTFLSQHSKSDIEKEEVQDSGQSSGQTSGQTSDQIGVATLSSIRGVLQEVFIS
YSYELEMLKISLKMLNSDVYKRMLMIRGNKLKGWAIKSAKDCCACGKSIGGNKEQLGEPV
FDEHVLAWEDSQQQQLLLIKSVKKPANDVFENEADKGKDQSFHFLELTYFKCGHAYHTNC
LEKLRSAKHCVLCAAHRH
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgacaatatcggagcaaaagtctaatttatacagaaaatcaagtctgtcaactaggtcg
ccatcctcaagcatttcgtcaagtttcaccaccataaacggtttacccagatcacgcttt
gacgatagagctactacaaagactagcttggcattacaagaatacaagaaaacttcattt
aacaatgaaaaaaagacgcaatggtcagatgaacaggctgctctaagtagtatgtttaaa
tggtcaccattaagcaaaataaatcatataatcgagtcatcgtcttttatttccgaaaga
ggcacagtgctgcaagtagtttcaaattcaatctatatcgcagttagtacttccaagtct
atagtggtcattttcaactacaaacaaagcatcgaagcaattttaaatgacgaactgaat
aaagcgctgaaactggggcaagggcaagggcaagggcaagggcaagggcaagagctgacg
cgagagattagacgtgatccaagacacgagctcgacaatgatcctcatttcttccccact
tcctcccgggcttccccattctctgctactgtagagttcacaaaaactgcccccaagggt
aaaatctcggctatggcattttcatcagactccagtttctttgtggcgggctatgagaac
ggactgatttgtgtttgggacttgaactcaaatagatctcggctgcttccgagtgtgatt
cgaccttttttcacaatctatccgaaattgccacgtgcaaggagcgaaatagaaggacac
gccatcaacactttaatcaaatctgttaggtttctacatccgcataataatcaaattatg
agcatagatgcctctggcttaagtctattccataaaattctgcagaagttgatgactcgt
tacgcgacatccaatagactatgtgcaaaaaaagttcaaatgcaagcccaattacctctt
ggctcagcgtatgagatcacggacgaaatgggagttatttcgttgctaagtaatgatgat
ttaatgattatttcatctacttctttaaatgacccagaagtgattaatcttcgacaacaa
tatacttataatatcagatcaaatacctcaaaccaactttcaatgagctggttcccttgt
tccaaaaaacctaaaggtgttgatacagagggtggcggaaaaggagttgttaatgcaaaa
cttgcgtgtagctgggggaacattttgcacatcattgaacttgataacgaaatcttgcct
agcaacttgcgtcagattgttgaagatgcaaaggataaagatcgagcggtcccgaaacta
ccatttaaaagaacctgcaaatggcacgaggcatccaacatagttgactcaaaatggatt
ctgactgacatattgtgtgtgtttctcttgatggaagatacttccggattacagatgaaa
acatattattatgatggctctactttgattccaattgctaaagatgaaatttgcggcgat
gtgcaaaaggttgatcttgccaaacaaagtttgttagcattgaaggacgcccgcttatat
atgggaagacaattaagttgggcagatctaattttgcgaaaagtttcccagagtcaatat
caagacgctttacagctagctgatgaatactatcaaacatcgtctgttggcttacttgca
gcagttgggctccccacgagtaaagataaacgtttaaaattgctatacccttactttttg
gatataatgagagcgtcaatgccgagtttaagcaaggatttcgagccagcgaaattgcat
atatattttgatgttttaacttatgccgcttctgacgacattttggaggaattgctcgaa
tcagttgatgacgaccaagtttatttcgaagttttggagccttatattttgtttggcaca
ataaaagtattacctccgaatgttttgaagcatttgattaaacattatgtatcaattgga
gaaggcgagttgttaaccgaacttttgtgcacattggatattaaaagcttagatattgat
ctcgccatcaaattgtgcacagagtatcgtttgaatgattgtttaatatacatctggaat
atgctattaaacgattaccagacacctttttttgattttgttcaagaatattcaagtccg
caatttgaacttacagaacagtctgcaaaggcatacacgtatatgacttatatactcaca
ggaaggcaatacccgacagatcgcttaattagcaataacaataataatgatgatgatggt
ggtggtggtgatgatggtggtggtggtgcgaagggtgcaattcggtcagtgtgcgacgct
cttttttctcatactgcaataagaagagatggcactttagttctaacacaagataaggat
attgtgtttccatacttgtatttatttcttaaacgaagttcgattctcatgatgtcggtg
ctaaatgaattttttgagtcgtcgtttttaaatgaaaatgagaaatacaatagacaatac
ctacttgaagtattgattgatttgtttagagttaatgaatcaagtttcacggagtttgac
aaatgtcaattggcaatctttattgcacgaaattacccgaaatatttccaattacttcga
cttcctgagtccatattggatactgttatcaacagactatgttcaaacactaatgcaacg
ctttccgaggattgtgaattggctctatgcagtttaataccactatatactcccgatgat
gagatgtttgttgaaaagttgaagctttccaagttttacaatgttcttttcgacattttc
aatgcacagggcaaatattctcgtgcattagaaatatggttgatgaagcgaagcaaaaat
gatggccatgatgctagtggtgtaaacaatcgcaatactgttggtgaagaggatgatcca
tgttttgctggagacaattcttttacatttgaaacaatgaatgtacttgaaagtgcgctc
ataaaaacacaagatgtaagtgagaaactcaatgttgcaaaggtaatcaaaagcaatttt
gagatattggtcagtctagattggaaaagatttttgcagctagttaacaggtatgttcca
agcatgcatactgaaattcttgatatcaataacgacaaaattgcttttgcatacatcaag
actttattttccatgcatattacagacctcgacccatttttgtatcgctatatccagctt
atgataaaggaggataggctcaatgcagtgcaatttgttgaaaaatggggagagaagatt
gtcagaagctcaagcaggaaccagattgaaaaggtttttaacgattttgcattcaccgag
ggcaacgcttgtttactagaaaacgataaggatcatcaaggtgcagtagactgcattttg
gctcatttgcaaagaataagtaaacatttgcgaaaacaagatcagcggcaacgtttcaca
agtttgttatcgtactgttttgcaatctgtgaaaactatggaaatctggtaaacaataaa
ggtgatgaaactcacaaaagtgataaaattgcgaaaagttatgaagatgttagtggcaat
ggcaagtacaataatgaaaatctacatgctgatgagaagctttggctaaagattataaat
ttcttggttgagatggcaaacacttttacttgtggggaagagcatctatatttcaaccag
tgcgtccaaaactgttttcgaagattgagtgactataaattaacgactagtgatggagag
caatcatttttggccatctttaacacctttctttctcagcactccaaaagtgatattgag
aaggaggaagtccaggatctgggtcaatctctgggtcaaactctgggtcaaactctggat
caaattggtgttgccacgttatcaagcataagaggagttttacaggaggtgttcatctcc
tattcttatgagctcgaaatgttaaaaatttcactaaaaatgttgaatagtgatgtctac
aaaagaatgctaatgattcggggaaacaaacttaaaggctgggcgatcaaatctgccaag
gattgttgcgcttgtgggaaatcaataggtggaaacaaagaacaactaggggaaccagtt
tttgatgaacatgtactcgcgtgggaggatagccaacaacagcaattattattgatcaag
tcagtgaagaaaccagcgaatgatgtttttgaaaacgaagcagacaaaggaaaagatcaa
ctgtttcatttcttagagctaacgtactttaaatgtggtcacgcatatcatacaaattgt
ttagagaaattaagaagcgccaaacattgtgtattgtgtgcggcgcatagacactag
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