Lodderomyces elongisporus: PVL30_002228
Help
Entry
PVL30_002228 CDS
T01116
Symbol
RSE1
Name
(RefSeq) pre-mRNA-splicing factor rse1
KO
K12830
splicing factor 3B subunit 3
Organism
lel
Lodderomyces elongisporus
Pathway
lel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PVL30_002228 (RSE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_002228 (RSE1)
03041 Spliceosome [BR:
lel03041
]
PVL30_002228 (RSE1)
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_002228 (RSE1)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
PVL30_002228 (RSE1)
Spliceosome [BR:
lel03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
PVL30_002228 (RSE1)
Complex B
PVL30_002228 (RSE1)
Complex C
U2 SnRNP specific factors
PVL30_002228 (RSE1)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
PVL30_002228 (RSE1)
TFTC complex
PVL30_002228 (RSE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
5234075
NCBI-ProteinID:
XP_001527373
UniProt:
A5DXW5
LinkDB
All DBs
Position
2:complement(2508801..2512472)
Genome browser
AA seq
1223 aa
AA seq
DB search
MLLNEDSVNLYNLTVKCATNFSYSVIGRFVPHRKDEQLVLVSSSHMLLYYMDENTGSLIN
IVNQNLFGVVNQVHKVQLNSNQDALVFTSDSGNLSVLTYDEHLKKFKSILQQPIAKNGWN
KTYPGEYLAVDPQNRCILVGAVEREKLLFRIETTISENGSAKFEISSPITFQTRRLLCLK
LVALYTEFENPSYCALEFDPEKQQTSFALYEFDQGLNYIVKQKVANSILPNDANYLIPVS
GAIGGVLLCGENWIRFVKANKDNIVLPLPRRGNQNTIIVNHVSHFLKKKGLFIFMQSTLG
DILTLVFDYDSDRSKVKDITITYFDTIPPSQSLNIFKSGFLFANSLNNNQVLYQFMKLGA
DSSDATSVKLSTVTDANSIDIAKKLHYKFEVRSLQNLSEIDTLESLSPITDSKLLPNSHL
ATLSSNHKMKTVMAGIPTSVLVESPLTLTPTNVFTTKLSEDSPNDEYLVFTSTLSSETLV
FSIGESLEDVTDSKFVLDQPTIAVQQVGKASVVQIYAYGLRHISTKIGNSKKVTDWYPPA
GISIVHAATNNKQVLIALSNSEVVYFETDPTDDQLSEYQEKLEVTSPVTSMTISPERSSF
AIIGCSDETIQVISLQPQSCLEVKSLQALSSKANSLAMLTNERTTYVHIGMENGVYARTK
IDKFSGKLSDTRVKYLGSKPIALEHVKLSEEVEGILAISSRTWAAFHYRGTYKIIPLLGV
DIDHGACIISEDIGGEAIVGTKGNNLVILSAGEEDSLFDPNQTVTVVSTNLRYQPRKLLT
QVGSRSYISQVGVNIVSPYATSLTKVVKDKVDSEYYETFGYERELGRSASCVQILQNRDV
KQTLEFNKNETIIGMTNAVFNKNEYLIVGVINTVSKKSTLYTFRPDKKKFLQYTHKTELN
YIPSVIDWFNDKVLVCSGNSISLYDLGQRQLLRKSFTRIDFLKNIVKYLPLSQNRVVFAD
SQSASVVFAKFDADGNQFIPIADDVIKRNCTALSKLDYDTIICGDKFGQISISRLDSQDS
RQVDQEWSIFKARTKELGAGFSSCVCKLHNICEFFIPDIITSFQPSRSTKKMQNTNSFNA
EGTTGYGDVGVGIDENVDGGNAGDSDDGCIVYTGIQGTIGVLISLLTKHEVELLFNLQLE
LRKLCNHDDDAVSGVASWISPLGKDHLKHRSYFNPVKNIIDGDFVECYLQLSQNWKVKIG
EAIDKSPNEIEKRLNDIRNRSII
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgttactcaatgaggattctgtgaatttatacaatttgactgtgaaatgcgcaacaaac
ttttcgtactcagtgataggccggtttgtcccccatcgcaaagatgaacagttggttctt
gtttccagtagccacatgctattgtattacatggatgagaacacgggaagcttgatcaac
attgttaaccagaacttatttggggtagtgaatcaagtgcataaagtccaacttaacagc
aaccaagacgccttagtcttcaccagcgattcgggcaatttatcagttttgacgtacgat
gaacatttgaaaaaattcaagtccatactacagcaaccaatcgcaaagaatggatggaat
aagacatacccgggtgagtacttggcagttgatccacagaaccgatgcatactagttggg
gccgttgagcgggaaaagttattatttcgaatagaaacaaccatcctggaaaacggttct
gcaaaatttgagataagttcacctatcacctttcaaacaagacgtttattgtgtttgaaa
ttggtggcattatataccgagtttgagaatccatcatattgtgcccttgaatttgaccct
gagaagcaacaaacactgtttgcactctacgagttcgatcaggggttgaattatattgtg
aaacagaaagttgctaattcgatattgcccaacgatgccaattacttgattcctgtactg
ggcgcaattggcggggtgcttctctgtggtgaaaattggatacggtttgtaaaagcaaac
aaggataatatcgtactaccattgccaaggcgtggaaaccaaaacaccattatcgtcaat
catgtaagtcattttcttaaaaaaaagggcttgtttattttcatgcaaagtacgttaggt
gatatcctcacattggtgtttgattatgatagtgatagatcaaaggttaaagacatcaca
atcacgtattttgatactattccgccaagtcaatctttaaacatatttaaatcaggtttt
ttgtttgcgaattctttaaacaataatcaagtattgtaccaatttatgaaactaggcgca
gacctgtctgatgccacttcagttaagttatctaccgtaacagatgcaaattccattgac
attgcaaagaaacttcactataaatttgaagttcgatctttgcagaacttaagcgaaatc
gacactttagaatcactcagtcccataacggactcaaagcttttaccgaattcgcatctt
gcaactttgtcgagcaaccataagatgaaaactgtcatggcaggaattcccacttcagta
ttggttgaatcccccttaaccttgacacccaccaatgtctttaccactaagctttccgaa
gactcgcctaatgacgagtatctagtgtttacgtcaacattgtcttccgaaactctagtg
ttttctattggggaaagtctcgaggatgtaaccgattccaagtttgtgcttgatcagcct
acaattgctgtacagcaagttggcaaagcatcagtagttcagatatacgcctatggattg
cgccatatctctaccaaaatcggtaatagtaaaaaagtgacagactggtacccaccagcc
ggtatttctattgtacacgctgcgacaaataataaacaagtattgattgctttatcaaac
tctgaggttgtttattttgaaactgatccaacggatgaccaattactggagtatcaggaa
aagctagaggtgacctcgccagtcacatcaatgaccatctcaccggagcgaagctccttt
gccataattggatgctccgatgagacaatacaagtaatttctttacagccgcaaagctgt
ctcgaggtcaagtctcttcaagcgctttcgtcaaaagccaactctttggcgatgttgact
aacgagcgtacaacatacgttcatataggtatggaaaatggtgtttatgcgagaaccaaa
attgataaatttagtggtaagctatcagacacgagagtgaagtatctcggctcaaagcct
attgcattagagcatgttaaattatcggaggaagtagaagggattctcgctatttcatca
cgtacttgggcagcatttcattatagaggaacttacaaaatcatacccttactaggggta
gacattgaccatggagcttgtattatatccgaggatattgggggtgaggccattgttgga
actaagggtaacaacttggtaatattatcagctggcgaggaggatagtctttttgatcca
aatcaaactgtgacggttgtgagcactaatttgaggtatcaaccaaggaaattgttgact
caagttggctcacgaagttatatcagtcaagtgggagtcaacattgtatcaccatatgct
acaagcttgacaaaagttgtgaaggacaaagttgactctgaatactatgaaacttttgga
tatgaacgagaattgggccgcagtgcatcttgtgttcaaattctacagaaccgtgatgtg
aagcaaacattggagtttaacaaaaatgaaactattattggcatgactaatgcagtattc
aacaagaatgagtacctcattgttggtgtcattaacactgtatcaaaaaaaagtacgctt
tacacatttagaccggacaaaaagaaatttttgcaatatacacacaaaactgaattgaac
tacatcccactggtcatagattggtttaatgataaagttcttgtttgctcagggaactcg
atttcgctatatgaccttggccagcgccagcttcttcgtaaatcatttacccggatcgat
ttcctcaaaaacattgtcaaataccttccactatctcaaaaccgagttgtgtttgcagac
tcgcaaagtgcttcggttgtttttgcgaaatttgatgccgatggaaatcagtttatacct
atcgccgatgatgtaatcaagcggaattgcactgcattgtctaaattagattatgacacg
attatttgcggtgacaagtttggtcaaattagcatatcacgattagatagccaggactcg
cgccaggtagatcaggaatggtcgatttttaaagccaggaccaaggaactcggtgcaggc
ttcagctcgtgcgtttgcaagctacacaatatctgcgaatttttcattcctgatattata
acatcttttcagccttcaaggtcaactaaaaaaatgcaaaatactaatagttttaatgcc
gagggaacaactggttatggtgatgttggtgttggtattgatgaaaatgtcgatgggggt
aatgcaggtgatagcgatgatgggtgtatcgtatacacaggcatacaaggaacaatcggt
gtcttaattctgctccttaccaaacacgaggtggagctattattcaatctacagctcgaa
ttgcgcaaactttgcaatcacgatgatgacgcagtaagcggggttgccagttggatatca
cctttaggcaaagatcatctcaagcaccgcagctactttaaccctgtgaagaatattatt
gatggagattttgttgagtgttacttgcaattgctgcaaaactggaaagtcaaaattggt
gaagcaatcgacaaatcacctaacgagattgaaaagcggttgaatgatataagaaataga
tctattatttag
DBGET
integrated database retrieval system
