Lodderomyces elongisporus: PVL30_002328
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Entry
PVL30_002328 CDS
T01116
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
lel
Lodderomyces elongisporus
Pathway
lel03030
DNA replication
lel03410
Base excision repair
lel03420
Nucleotide excision repair
lel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVL30_002328 (RFC4)
03410 Base excision repair
PVL30_002328 (RFC4)
03420 Nucleotide excision repair
PVL30_002328 (RFC4)
03430 Mismatch repair
PVL30_002328 (RFC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lel03032
]
PVL30_002328 (RFC4)
03036 Chromosome and associated proteins [BR:
lel03036
]
PVL30_002328 (RFC4)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_002328 (RFC4)
DNA replication proteins [BR:
lel03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PVL30_002328 (RFC4)
DNA Replication Termination Factors
ELG1-RFC complex
PVL30_002328 (RFC4)
Chromosome and associated proteins [BR:
lel03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PVL30_002328 (RFC4)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PVL30_002328 (RFC4)
Check point factors
HRAD17(Rad24)-RFC complex
PVL30_002328 (RFC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_3
AAA_lid_RFC1
AAA_14
RuvB_N
AAA_22
nSTAND3
RCF1-5-like_lid
AAA_16
Rad17
nSTAND_NTPase5
DNAX_ATPase_lid
AAA_assoc_2
Mg_chelatase
Viral_helicase1
AAA_33
AAA_19
NTPase_1
AAA_5
bpMoxR
Motif
Other DBs
NCBI-GeneID:
5230674
NCBI-ProteinID:
XP_001523385
UniProt:
A5E6J2
LinkDB
All DBs
Position
3:complement(12380..13345)
Genome browser
AA seq
321 aa
AA seq
DB search
MSHTTLDLPWVEKYRPRVLDDIVGNEETVERLKIIAKDGNIPHMIISGLPGIGKTTSVHC
LAYELLGKEYYHQATMELNASDDRGIDVVRNKIKQFAQTKISIPPGRTKIIILDEADSMT
PGAQQALRRTMEIYSNTTRFVFACNQSSKIIEPLQSRCAILRYNKLSDEEVLARLLEIIK
AEDVKFNNEGLQALIFSAEGDMRQAINNLQSTVAGFGFVNDVNVFKIVDQPHPLVIQKIL
THSLKKDIDQALQLLDGLWSKGYSAIDIVTSSFKVAKTIPNVDESKRLEMIKEIGFTHMR
VLEGLGTYLQLSGMYAKICNL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacaccactttggatttgccatgggtagaaaagtatcgtccacgtgttttggat
gacattgtgggaaacgaagaaacagttgaaaggttaaagatcattgcgaaagacggcaac
atccctcatatgattatttcaggcttgcctggtattgggaaaaccacttcggtgcattgt
ctcgcatatgaacttcttgggaaagaatactaccaccaagcaaccatggaacttaatgca
tctgacgatagaggtatcgatgtagttagaaacaagatcaagcaatttgcccagacaaag
atcctgataccgccaggacgaaccaagatcattattttggacgaagccgactcaatgacc
cctggagctcagcaagcgttaagaaggactatggagatttattccaatacgacaaggttt
gtgtttgcatgcaaccagtcgctgaaaatcattgagcccttgcaatcacggtgtgctatt
cttcgatacaataaattatccgacgaagaagtgttggccagattactcgagatcataaag
gccgaggatgtcaaattcaacaacgaagggttgcaagcgttgatatttagcgcagaggga
gatatgcgtcaagctattaataacttacagagtactgtagcagggttcgggtttgtcaat
gatgtcaacgtgttcaagattgttgatcagccgcatcctttggtgattcaaaagatcttg
acgcactcgctcaagaaggatatagaccaagcattgcagttattggatggtctttggctg
aagggttattcggcaattgatatagttacgctgtcgttcaaagttgccaagactattccc
aatgttgatgaactgaaacgattggagatgatcaaagagattgggtttacgcatatgaga
gtgcttgaaggtttaggtacttatctacagttgagtggaatgtatgccaaaatatgcaat
ctctaa
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