Lodderomyces elongisporus: PVL30_002436
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Entry
PVL30_002436 CDS
T01116
Name
(RefSeq) uncharacterized protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
lel
Lodderomyces elongisporus
Pathway
lel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVL30_002436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_002436
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PVL30_002436
mRNA degradation factors
5'-3' decay
Lsm complex
PVL30_002436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
5230561
NCBI-ProteinID:
XP_001523497
UniProt:
A5E6V4
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All DBs
Position
3:complement(273161..273721)
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AA seq
186 aa
AA seq
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MSSASPQQQQQQQQQQSQPGSSTVSQKQKSSDPFATNVENLYLESYAFTTAAAIVGSVDR
KIFVLLRDGRNLFGILRTFDQFANLVLQDTFERIYLDGDENDGQPKQFGEEYRGVFMVRG
ENVVMMGELDIDTEDGHLEKLQQIPFEEAEKGLKLKHEQKVKQEKRRTKTLLKQGLVNDF
YKSDLY
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcgcgtctccacaacaacaacaacagcaacagcaacaacaaagtcagccagga
tcttccacagtatcacagaaacaaaagtcgagtgatccttttgctactaatgtggagaat
ttatacttggagagttatgcattcacaacagcagccgcaatagttggctcagtagatcgc
aagatctttgtgctattacgtgatggacgcaatttgtttggtattttgcgaacattcgat
caatttgccaatttggtgctacaggacacttttgaacggatatacctagatggagatgaa
aacgatggacagccgaaacagtttggcgaggaatacagaggggtgtttatggtacgtggt
gagaatgtcgtgatgatgggagagttggatattgatacagaagatggccatttagagaaa
ttacagcaaattccatttgaagaagccgaaaaggggttgaagctcaaacacgaacaaaaa
gtgaaacaagagaaacgaaggacaaagacattgttgaagcagggtttggtaaatgacttt
tataaatctgatttgtactaa
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