KEGG   Lodderomyces elongisporus: PVL30_002436
Entry
PVL30_002436      CDS       T01116                                 
Name
(RefSeq) uncharacterized protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
lel  Lodderomyces elongisporus
Pathway
lel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PVL30_002436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lel03019]
    PVL30_002436
Messenger RNA biogenesis [BR:lel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PVL30_002436
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     PVL30_002436
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 5230561
NCBI-ProteinID: XP_001523497
UniProt: A5E6V4
LinkDB
Position
3:complement(273161..273721)
AA seq 186 aa
MSSASPQQQQQQQQQQSQPGSSTVSQKQKSSDPFATNVENLYLESYAFTTAAAIVGSVDR
KIFVLLRDGRNLFGILRTFDQFANLVLQDTFERIYLDGDENDGQPKQFGEEYRGVFMVRG
ENVVMMGELDIDTEDGHLEKLQQIPFEEAEKGLKLKHEQKVKQEKRRTKTLLKQGLVNDF
YKSDLY
NT seq 561 nt   +upstreamnt  +downstreamnt
atgtctagcgcgtctccacaacaacaacaacagcaacagcaacaacaaagtcagccagga
tcttccacagtatcacagaaacaaaagtcgagtgatccttttgctactaatgtggagaat
ttatacttggagagttatgcattcacaacagcagccgcaatagttggctcagtagatcgc
aagatctttgtgctattacgtgatggacgcaatttgtttggtattttgcgaacattcgat
caatttgccaatttggtgctacaggacacttttgaacggatatacctagatggagatgaa
aacgatggacagccgaaacagtttggcgaggaatacagaggggtgtttatggtacgtggt
gagaatgtcgtgatgatgggagagttggatattgatacagaagatggccatttagagaaa
ttacagcaaattccatttgaagaagccgaaaaggggttgaagctcaaacacgaacaaaaa
gtgaaacaagagaaacgaaggacaaagacattgttgaagcagggtttggtaaatgacttt
tataaatctgatttgtactaa

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