Lodderomyces elongisporus: PVL30_002640
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Entry
PVL30_002640 CDS
T01116
Symbol
POL2
Name
(RefSeq) DNA polymerase epsilon catalytic subunit
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03030
DNA replication
lel03410
Base excision repair
lel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVL30_002640 (POL2)
03410 Base excision repair
PVL30_002640 (POL2)
03420 Nucleotide excision repair
PVL30_002640 (POL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lel03032
]
PVL30_002640 (POL2)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_002640 (POL2)
Enzymes [BR:
lel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PVL30_002640 (POL2)
DNA replication proteins [BR:
lel03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
PVL30_002640 (POL2)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
PVL30_002640 (POL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
DNA_pol_B
zf_DPOE_2
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
5232603
NCBI-ProteinID:
XP_001525219
UniProt:
A5E0L0
LinkDB
All DBs
Position
3:851597..858238
Genome browser
AA seq
2213 aa
AA seq
DB search
MPSRPGFKGSSSARYVKNETRSGGRYKTTEYRARPQGASASSATPVDPYVANNPMLNESI
QKKELVSRIDQIDSLMGFERFEHGENDGNKPRKGWLINLHATTIPSDNYLTGYSGVDYYF
LDEEGGSFKATLQYDPYFFVDILSADYASEIEEWMRRFLETCKVKSFDRVVKEDLSLPNH
LVGLKKSLIKLTFHNIQDLLMARRLLTPIIKENQMNKESRDMFNFNMDIDASDPSKLLSD
IKEYDVPYHVRVAIDKQIRVGKWYNVFAKHGKVEFVEDKELIAFADPVVLAFDIETTKAP
LKFPDAKIDQVMMISYMIDGEGFLITNREIISEDIADFEYTPKPEYPGLFTIFNEPDEKH
VLLRFFEHIRDVRPTVIATFNGDFFDWPFVENRSRFHDIDMFDEIGFAKDNEGEYKSKYC
VHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYEKPQLLAEYSVSD
AVATYYLYYKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYEGNILLPNKHSD
PIERFYDGHLLESETYVGGHVESLEAGVFRSDIPTHFKIDPNAIDELLGNLHKSIKFCIE
VENNKKMEEVENFDEVYSQIEAALTELKQNPARNEKPLIYHVDVASMYPNIMTSNRLQPD
SMKSEEDCAACDFNRPGKNCDRRLPWSWRGEYYPAEMNEYNMIKRTLQNEEFPPQKPWLP
PRTFDELSYAEQASAIKKRISDYSRKVYHRVKQSKVVTREAIICQRENPFYVDTVRSFRD
RRYEFKGLAKVWKGKANKISKSNTIARDEANKMVVLYDSLQLAHKVILNSFYGYVMRKGS
RWYSMEMAGITCLTGATIIQMARKLVERIGRPLELDTDGIWCILPQSFPENFSLKCKDGK
KILLEYPCSMLNYLVHKDFTNDQYQTLVDPETFKYETRSDNSIFFEVDGPYKAMILPTSK
EEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDSLETCYQAV
ASVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLAEYGDQKSTSITTAKRLGEFLGE
EMVKDAGLATKYIISAKPIGAPVTERAIPVSIFSSEKKEIFMKKWMKDPSMTKFSPKDVI
DWDYYYERLASVVQKIITIPAALQNVKNPVPRVPHPDWLKKRIDNQGSSKQQSSIAKFFN
AGTKDESKVRDIEDFGGLDTESIRTNLDNLRKKRKARNASSVQEMEEREERNQALLNGSC
PSIADDYTGFLQYQKAKWSLQASGRERKRKLFGSQAQSSQRSTVGGMFKKQAENVAGTDW
EILEYKEDPMKPGDLKVYVSAAEKIHTFTFHVPKKVFASFKTPLSSRQSIPGCIIEKSTA
ILPNGHDGSNLYKLTMPQSEYQDQISNVESLLQSSNTLGIYEGEVSPIQRAVLELGHTVK
FDDTKVGALGRGLKNGFDTKDLIKVHGDNYLKRFDMDIVYLLHIVTNSYEYFTLFKSWEN
HCIMFVLKPSANAQELPNSFHKIYQELYAGKSEKLKKSQRIIEYPPKITFEALYYHDKLK
LFKKLNQAIGKLHESRSAKALFAIQSPYADRVLNGLSSTFDFPTVKMAVNELSLPAVGWQ
VLISKRVINHYFVLGSWLQNLIALSRYGGVPLCNLQIENMSYLIDVEYARRLIENNIVLW
WSPNPLPDHGGFENDKPINSESLKFPVINNPEVYETACLEVEIGTLTINTILTSSIINEA
EGTDLADDSVQYDNNNGAGSFAVDSFSTPALLILRAMVKDWWDDALSNNQSADSVMNALI
PWVQKKDSYLYDPALHYHVHNLSSKALLQLVNEFKKMGSQVIFANRTKLLLQTSKISVEN
SYAYGQYIIKAARSKPLFNFLDLRIVKYWDLLIWMDEFNYGGRCCPEIISADEQNLTVEN
KWLLKKYLPVVFQDEFEDWIIIFLNALLQYKQKTLMGTQSGGTPRITQIAHILNGQKKLQ
NKELEHEEVDLTNGVAEEFRKPLLVRMEKLYRRQIDAILNPEFKKEYEFPKLPGSHISLR
NPALELVKFICAVLSLSKKRNIEIRVLRKELLQIFDIKEFSAQANFINPATSLVIPHVIC
DYCNQVRDIDICREEEGGVWNCTFCHKPFNKVGLEEEIIAQFTHLFVEYYGQDLKCEKCS
TIRKNNLDLFCKCSGNWVETINVADVDKQVHIYNNVANFYNLQLLKGWIEECL
NT seq
6642 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgagaccaggattcaagggctccagttcagcgagatacgtgaaaaatgaaacc
cgtagtggtggtagatacaagacaacagaatatagagccagaccacaaggcgcactggca
tcatctgctactccagttgatccatatgttgccaataaccctatgctcaatgaatccata
cagaaaaaagaactcgtgtcacgaatagaccagattgactcccttatgggatttgaacga
tttgaacacggtgaaaacgatgggaataagcctagaaaaggttggttgatcaatttgcat
gcaacaaccatacctagtgataattacttaactggttattctggtgtggattactatttc
cttgatgaagaaggaggaagttttaaagcaacattgcagtatgacccatatttctttgtc
gatatacttagtgccgattacgcatcagagattgaagagtggatgagaaggtttttggaa
acttgtaaagtgaaaagctttgatagagtagtgaaggaagatttgtccttaccaaaccat
ttggttggactcaaaaagagtttaatcaagttgacattccacaatatacaagacctctta
atggcaagacgattgttgaccccgataatcaaagaaaatcagatgaacaaagagtcgaga
gatatgttcaacttcaatatggacatcgatgcttctgacccactgaaacttttgagcgat
ataaaggaatacgacgtgccataccatgttcgagtggctattgacaaacaaatcagagtt
ggaaaatggtataatgtatttgccaaacatggcaaagttgaatttgttgaagataaagaa
ctcattgcatttgctgacccggtagtgttggcattcgatatagaaacaacaaaggcacct
ctcaaattccccgatgccaaaattgaccaagtcatgatgatttcatatatgattgatggt
gaaggttttctcattaccaacagagagattatttctgaagacattgcagactttgagtat
actccaaagccagagtaccccggtcttttcactatatttaacgaaccagacgagaaacac
gtgttgctccggttctttgaacatataagagacgttagacctacagtgattgctacattt
aatggtgatttctttgattggccatttgttgaaaatagatctagattccatgatattgat
atgtttgatgaaattggatttgccaaggataacgaaggcgaatacaagtccaaatactgt
gtgcacatggattgtttcagatgggtcaagagggattcctatttgccgcaaggttcacaa
ggtttgaaagcagtcactacggcaaagttgggatataacccaacggaattggacccagag
ttgatgacaccttatgcatatgaaaaaccacaattgttggcagagtactcggtttccgat
gcagtggcaacttactacttatactacaaatacgtgcatcctttcattttttctctttgt
acaatcattccgttgaatccagatgaggttttgcggaaaggtacaggtacattatgtgaa
atgttgctctccgtgcaggcatacgagggaaatatattacttcccaacaaacattctgat
cctatagagaggttttatgatggccatttgttggaatcggagacttatgttggtggacac
gtggaatcattggaagctggcgtgtttcgaagtgatatcccaactcactttaaaatagac
cccaatgcaattgatgaattattagggaacttgcacaagtcgatcaaattttgcattgag
gtggaaaacaacaagaagatggaagaggtggaaaactttgacgaggtttattcacaaatc
gaggccgcattgacagaattgaaacaaaacccagcgagaaacgagaaaccgcttatttac
catgtagatgtggcatcaatgtatccgaatataatgacgtcgaatagacttcagccggat
tcgatgaagtctgaggaagattgtgcagcatgcgattttaatcgaccaggcaaaaattgt
gatagacgattaccttggtcatggagaggtgaatattacccagcagaaatgaacgagtat
aatatgatcaaacgaactttacaaaatgaagaatttccaccgcaaaaaccatggttacct
ccaagaacctttgatgaactttcttatgccgagcaggcctcagctatcaaaaagagaatc
agtgattattcaaggaaagtgtaccacagagtcaaacaaagtaaagttgttactcgtgaa
gccataatttgtcaaagagaaaacccattttatgttgatactgttagaagctttagagat
agaagatatgaatttaaaggtttggcaaaagtgtggaaggggaaagccaacaagatcagc
aagagcaataccattgccagagacgaggccaacaagatggttgtcttgtatgactcgttg
caacttgcccataaagtcattttgaattcattttatggttatgttatgagaaagggttcg
agatggtactcgatggaaatggccggaatcacatgtcttactggtgctactattattcaa
atggcaaggaaattggttgaaaggattggtagaccattggagttggataccgatggtatt
tggtgtatcttaccccaaagtttcccagagaatttcagtctcaaatgtaaagatggcaag
aaaattttgcttgagtacccctgttcaatgttgaattatttagttcacaaggatttcaca
aatgatcaatatcaaacattggttgatcctgaaacgtttaaatacgaaacaaggtcagat
aattcaatcttttttgaagttgatggaccatacaaagctatgatcttgcccacatcaaaa
gaggaaggtaaagggttgaagaaaaggtatgctgtgttcaatgacgatggttctcttgcc
gagttgaaaggatttgagttgaaaagaagaggtgagttgcagttgattaagaactttcaa
tcagacattttcaagttatttttggaaggcgatagtttggaaacttgttaccaagcagtt
gcttctgttgcaaataactggttagatgtcttggacacaaagggaggtatgcttgaagat
gaagacttgattgagcttatttgtgagaatagaagtatgtcgaaaagtttggcagaatat
ggtgatcaaaaatcaacttcgattacaactgccaaaaggttgggtgaatttttgggggag
gagatggtcaaggatgcaggattagcgacaaagtacattattagtgccaagcctataggt
gctccagttactgaaagggctattcctgtttcaattttttcatcggagaaaaaagaaatc
tttatgaaaaaatggatgaaggacccgtcaatgaccaagttcagtcccaaagatgtaatt
gattgggactactattatgagagattagcttctgttgtacaaaaaatcatcaccattcct
gctgcattgcaaaatgtgaaaaacccagtgccaagagttcctcatccggattggttgaaa
aagagaatagataaccagggcagctcgaaacaacagagttcaattgccaaattctttaac
gctggcacaaaggacgaaagtaaggtgagggatattgaagattttggtggtcttgatact
gaatccataaggacaaacttggacaacttgagaaaaaagagaaaagcaagaaatgcgagc
ctggttcaagagatggaagagagggaagagagaaatcaagctcttttgaatggctcttgt
ccatctatcgctgatgattatactggttttttgcaataccaaaaggccaagtggtctcta
caggcttcgggaagagaacggaaaaggaaattatttggctcacaagcacaaagttctcaa
aggtcaactgttggtggcatgtttaaaaagcaagcagaaaatgttgccggcacagattgg
gaaattttggaatacaaggaagatccaatgaaaccgggtgatttgaaagtttatgtttct
gcagcagagaaaattcatacgtttacttttcatgtcccaaaaaaagtttttgcttcattc
aagacaccgctttcatctaggcaaagtatacctggttgtattattgaaaaatccaccgcc
attttgcccaacggacacgatggtagcaatttgtacaaattgacaatgccacaatccgaa
taccaagatcagatttctaatgtagaaagtttattgcaaagctcaaatactttggggatc
tacgaaggagaagtatctcccatccagagagctgtgttggaattgggtcatacggtaaag
tttgatgatactaaagttggtgcacttggaagaggattgaagaatggttttgataccaag
gatttgatcaaggtacatggtgataattatttgaaaagattcgacatggatattgtgtat
ctcctacacattgttaccaatagttatgagtactttactcttttcaagtcttgggaaaat
cactgtataatgtttgtgttgaaaccatctgcaaatgcacaagagttgccgaatagtttt
cataaaatttatcaagaactatatgctggtaaaagtgagaaactaaaaaaatcacaaaga
ataattgagtacccaccaaagattacatttgaagcattgtactatcacgataagcttaaa
cttttcaagaagttgaatcaagcaattggaaaattgcatgagagtagaagtgctaaggct
ttatttgcgatccagtctccgtatgctgatagagttttgaacggattgagttcgacattt
gatttccccacagtaaagatggcagtgaatgaactctcgcttccagcagtgggctggcaa
gtattgatttcgaaaagagtgattaatcattattttgttcttggctcatggttgcaaaac
ttgattgcactttctagatacggtggagttcctttgtgtaatttgcaaattgagaatatg
agttatttaatcgatgtcgaatatgcgagaaggcttatagaaaataacattgttttatgg
tggtctccaaaccccttaccagatcatggaggttttgaaaatgacaagcccataaattcc
gagagtttaaaatttcccgttatcaataatccagaagtgtacgagactgcatgcctcgaa
gtggagattggaaccctcaccatcaacaccattttaaccagttcgattattaatgaggcc
gaggggacagatttggctgatgactctgttcagtatgacaacaataatggcgctggctct
tttgctgtggattctttttcaacaccagcattgttgatcttgagagcgatggttaaggat
tggtgggatgatgcattaagtaacaaccagagtgctgattctgtgatgaatgctttaatt
ccttgggtgcaaaagaaggactcatatttgtacgatccggcattgcattaccatgtgcac
aatctaagttcaaaagctttgttgcaattggttaatgagtttaaaaaaatgggttctcaa
gtaatatttgcaaatagaacgaaattgcttcttcaaacgtccaagatttccgtggagaac
tcctacgcttatggccagtatataatcaaagctgctagatcgaaaccacttttcaatttt
cttgatttgcggattgtcaaatactgggacttgcttatatggatggatgagtttaactat
ggtggacgttgctgcccagagattattagcgcagacgagcaaaaccttacagttgagaat
aagtggctcttgaaaaagtatttgccagttgttttccaagatgagtttgaggattggatt
ataatctttttaaatgcattattgcagtataaacagaaaacattgatgggtacacaatct
gggggaacaccaagaattactcaaattgctcatattctcaatggtcaaaagaaactccaa
aacaaagaacttgagcatgaagaagtcgatctcaccaatggcgttgccgaggagtttaga
aaaccattgcttgtgagaatggaaaagttgtatcgccgccaaattgacgcgattctcaat
cctgaatttaaaaaggagtatgagtttccaaaacttcctggctcacatatatcattgcgg
aatcctgcgctcgagctcgttaaatttatttgcgctgtactttcgctatcgaaaaagaga
aatatcgagataagagtgttgaggaaggaattgctccagatattcgatatcaaggaattt
agtgctcaagcaaactttataaatccagccacatcattggttatacctcatgttatttgt
gattattgtaaccaagtacgtgatatcgatatatgtcgtgaagaagagggcggcgtgtgg
aattgcactttttgccacaagccattcaacaaggttggtttggaagaagagattattgca
cagtttacgcacttgtttgttgagtattatggtcaagatttaaaatgtgaaaagtgctca
actataagaaagaacaatttggatttgttttgcaagtgttcagggaactgggttgagact
atcaatgttgcagatgtcgataagcaagtgcatatttacaataatgttgcaaatttttac
aacttgcaacttttgaaaggatggatagaggaatgtttatag
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