KEGG   Lodderomyces elongisporus: PVL30_002663
Entry
PVL30_002663      CDS       T01116                                 
Symbol
TAF5
Name
(RefSeq) Transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
lel  Lodderomyces elongisporus
Pathway
lel03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lel00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PVL30_002663 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lel03021]
    PVL30_002663 (TAF5)
   03036 Chromosome and associated proteins [BR:lel03036]
    PVL30_002663 (TAF5)
Transcription machinery [BR:lel03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PVL30_002663 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     PVL30_002663 (TAF5)
Chromosome and associated proteins [BR:lel03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     PVL30_002663 (TAF5)
    STAGA complex
     PVL30_002663 (TAF5)
    TFTC complex
     PVL30_002663 (TAF5)
    SAGA complex
     PVL30_002663 (TAF5)
    SLIK complex
     PVL30_002663 (TAF5)
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR3_2nd TFIID_NTD2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_VPS8 eIF2A RMC1_N LisH Beta-prop_WDR35_TULP_N PROPPIN Beta-prop_EIPR1 Beta-prop_SPT8 WD40_RFWD3 Tricorn_2nd Beta-prop_DCAF12 VPS8_N Beta-prop_NWD2_C WD_LRWD1
Other DBs
NCBI-GeneID: 5232601
NCBI-ProteinID: XP_001525241
UniProt: A5E0N2
LinkDB
Position
3:915206..917815
AA seq 869 aa
MSNVNKEQGSPPQGGTNVQQSSPQQTPSQATSRPPQQAQAPPQSQAPPQSQSQSQAPPPQ
QQQQQQQQQQQQVRANQPQYSQADLNRIVLEYLNKKGYHRTESMLRLESTNTPTPAVEPA
TPGNTTLAPPGEITGGSASNSNNRSTNTNTNTNTTNTTSTTSTTSTTNTNVPANSTASTT
TNSTANSTTSTANNSNQLAQDKAAKYEKELRELREKQAKIEKELQETKDRELKMAKEADL
KELKLIEAKTRVENDPETYFTAYSMLRKWVESSLDLYKPELSRVLYPLFIHCFLELITKG
FNAKSKEFFDKYKSDHMILHGMEVKKFAGLSLPEHLKEDDTAVAYRKYRYRILVSKTSLN
LLLYFLHENEAVGGSILIRIINQYLDPVISKNKPDKIDQEGEANPEEGISEYIANTNELE
QFNSEKEVKLGKAQLDPEVVKEVEAELKVKDEKLEPVNGKTLNEEFKEMTKPDADSPNKD
TLPFPMKDSADIKKLIMQVEDSRSKIKLGAIQASYPSVCMYTFHNTNNDMTCIAFNDDST
LVAAGFQGSYIKIWSLDGKPLQSQSSSQSKKDRKNHHLPDNCRKLIGHSGPVYGISFSPD
NKFLITCSEDKTIRLWSLDTFTALVSYKGHNQPVWDVKFSPLGHYFVTSSHDQTARLWAT
DHIYPLRIFAGHINDVDCVEFHPNSHYVFTGSSDKTCRMWDVQTGHCVRVFMGHTNAINT
IAASPDGRWLASAGDDNVINIWDIGTGRRLKTMKGHGRSSIYSLAFSRDGTVLVSGSGDC
SVRVWDVKKNTNDAGPEPEALLNATGSANASEATAEEGGKTQQQQQQSSRRDVIASSDHM
AAFFTKKTPVFKVHFTRRNLCFAAGAFQP
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgagtaatgtcaataaggaacaagggagtccaccacagggcggaacaaatgtccagcag
tcgctgcctcaacaaacaccatcacaagcgacttcacgtccgccacaacaagctcaagca
ccaccacaatcacaagcaccaccacaatcacaatcacaatcacaagcaccacccccacaa
caacaacaacaacaacaacagcagcagcagcagcaggtgcgagccaaccaaccgcaatac
tcacaagctgatttaaaccgaatagtgttggaatatttgaataagaaagggtatcataga
accgaatcgatgttaagattagagagcacaaatacacctacaccagccgtagagccagca
actccaggaaatacaacactagcaccacctggagaaatcactggtggtagtgccagtaat
agcaataacaggagcactaatactaatactaatactaataccaccaataccaccagcacc
accagcaccaccagcaccaccaacactaatgtccctgccaattccacggccagtaccacc
accaactctactgccaactctactaccagtaccgcgaacaatagcaaccaattagcacaa
gataaagccgctaaatacgaaaaagaattacgcgagttgagggaaaaacaagcgaaaatt
gaaaaagagttgcaagagacgaaagatcgtgaattgaagatggctaaggaagcagattta
aaggaattgaaattgatagaggcaaaaacaagagttgaaaatgacccagaaacttatttt
actgcgtattccatgttgcgcaaatgggttgaatcgtcattggacttgtataaaccagag
ctttcacgtgtattatacccgctatttatccactgcttcttggagttaattaccaagggg
ttcaatgccaagtcaaaggaattttttgacaaatacaagtcagatcatatgatcttgcat
ggaatggaagtaaaaaaatttgctggtttatccttacccgaacatcttaaggaagacgac
accgctgtggcttataggaaatacaggtataggatattggtatccaagacttcgctcaat
ttgctattatactttcttcatgaaaacgaagccgttggtgggtctatcttgatccgtata
atcaaccagtatttagacccagtgatttcaaagaataaacccgataagattgatcaagag
ggagaagcaaacccggaagagggtatttcagagtatattgctaataccaatgagttggag
cagttcaatagtgaaaaggaggttaagttgggcaaagctcagttggatccagaggttgtt
aaagaagttgaagcagaattaaaagtcaaggatgagaaattggaaccagtcaatggcaaa
acacttaacgaggagtttaaagaaatgacgaaaccagatgctgattcaccaaataaggat
actttaccttttccaatgaaggattctgcagatatcaaaaagttgattatgcaagtggag
gattcgcgttccaagatcaagttgggtgcgattcaagccagctacccatctgtgtgcatg
tatactttccataatacaaacaacgacatgacatgtattgcatttaatgacgattctaca
ttggttgctgcaggattccaaggaagctatatcaagatatggagtcttgatggtaagcca
ttgcaatcgcaatcatcatcacaaagtaaaaaggatagaaagaaccaccacttaccagac
aattgtagaaaacttattggacacagtggaccagtttacggtatttcgttttctccagat
aacaagtttctcatcacttgttccgaggacaagacgatccgtctttggtcattggacact
ttcactgcgcttgtttcgtacaagggccacaatcagccagtatgggatgtgaaattttca
ccattgggccactattttgtcacatcatcgcacgatcaaaccgcacggttatgggcgact
gaccatatttacccattgaggatatttgcaggccacattaacgatgttgactgtgtcgag
tttcaccccaactcgcattatgtgtttactggttctagcgataagacatgcagaatgtgg
gatgtgcagactggtcattgtgtacgtgttttcatggggcatacaaatgcaatcaacacg
attgctgcaagtcccgatggtcgatggcttgcgagtgcgggcgatgataatgtgattaat
atctgggacattggcacgggaagaagattgaagacgatgaagggccatggccgttcatcg
atatactcattggcattttcccgcgatggaactgttttggttagtggatctggcgattgt
agtgtgagagtttgggatgtgaaaaagaatacaaatgatgctggacctgaacctgaggca
ttgttgaatgccacggggtctgctaatgcaagcgaagcgacggccgaggagggtggaaaa
acacagcaacaacaacagcaactgagtagaagagatgttattgccagtagtgatcatatg
gctgctttttttacaaaaaagactcctgttttcaaggtgcatttcacaagaagaaacctt
tgtttcgcagctggtgcatttcagccatga

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