Lodderomyces elongisporus: PVL30_002677
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Entry
PVL30_002677 CDS
T01116
Symbol
NCL1
Name
(RefSeq) tRNA (cytosine-5-)-methyltransferase ncl1
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
lel
Lodderomyces elongisporus
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lel03016
]
PVL30_002677 (NCL1)
Enzymes [BR:
lel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
PVL30_002677 (NCL1)
Transfer RNA biogenesis [BR:
lel03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
PVL30_002677 (NCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
5232787
NCBI-ProteinID:
XP_001525254
UniProt:
A5E0P5
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All DBs
Position
3:complement(949658..951784)
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AA seq
708 aa
AA seq
DB search
MPKRNYKKGAKGKGFDKRNNNSNSNNNNNTTTDDNGNWTEAPRYSEVWEKYYKTLNLIPE
EEWEAFKTACQTNLPMTFRITGSRRHAEEIRNIFLERHVKNLQGQTFEGIDITPKNIAFY
PDNLGWQIDVGKSVIKKQKDFAKTQRFLVLETEVGNISRQEAVSMIPPLLLDVKPHHYVL
DMCAAPGSKTAQLVEALHAEDEKKLPTGFVLANDSDYKRSHMLVHQVKRLNSPNFLVVNH
DAQLFPRVKLNGEAEYLKYDRILCDVPCSGDATMRKNINVWKDFRVGNALGLHPLQFNIL
NRGLQLLKRGGRLVYSTCSLSPIENEAVVAEALRRWGKKIKLVNVDNESPGLKRRQGISD
WKVFGKDMEIKNKGEDGLPDTLFPPTEEEAKDFNLQNCVRVYPHLQNTGGFFITVFEKLD
DEPVKRKAVDAGSESLEAKKPKLADASESNETSTPQPVVVPNDTVVADKPVEMKKTKLPR
DANEEPFIFLDPENPKIAECYGFYGFSDSFRKDCTLVRNSTGEPVRTVYYASPPIKELLT
IKEQKLKLVHGGIKLFVAQRSESTSCPWRIQTEALHTIEHFVGKERRLKCNLELLRYLFT
NGFPKIDEIREQNIDAEFLEGLESKEEGCLFLEVERGNNLEALFLPIWKGRSNVNLMVSK
KDTHELLSRVFDIDTSAKDEVKEVIHLKKITEERQEKKDEEAEDTSKD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaaattataaaaagggtgccaaaggtaaaggcttcgacaagagaaacaac
aacagtaacagtaacaacaacaacaacactaccaccgacgacaatgggaactggactgag
gctccaaggtatagtgaagtatgggagaagtattacaagactttgaatcttattcccgag
gaagaatgggaagcttttaaaacagcttgccagacaaacttgccaatgacttttagaatc
acgggaagcagaagacatgctgaggagatacgtaacatttttcttgaaagacacgtgaaa
aatttgcaaggacaaacttttgaaggcattgatatcactcctaaaaatattgcattttac
cctgacaatttgggttggcaaatcgatgtgggtaagctggttatcaaaaaacaaaaagat
tttgcaaagacacagagatttttggtattggaaaccgaggttggtaatattagtcgacaa
gaagcagtgtctatgattcccccattgctcttggatgtcaagccacatcattacgtgttg
gacatgtgtgctgcacctggttccaagaccgcgcaattggttgaggccttgcatgctgaa
gacgagaaaaagttaccaacaggttttgttttggcaaatgactctgattataaacgtagt
cacatgttggtacatcaagttaaaagattgaattcgccaaactttttagttgttaaccac
gatgcacaattgtttcctcgtgtcaagttgaatggcgaggcagagtacttaaagtatgac
agaattctttgtgacgttccttgttcaggtgatgcaacaatgaggaagaacatcaatgtg
tggaaagatttcagggttggaaatgcacttggtttgcacccattgcaattcaacatcttg
aaccgtggattgcaacttttgaaaaggggtggaagattggtttactcaacatgttcgtta
tctcctattgaaaatgaagcggtggttgcagaagcattgagaagatggggcaagaaaatt
aagcttgtgaatgtcgataatgagtcgcccgggttaaagagaagacaaggaatatcggac
tggaaggtgtttggcaaagatatggagatcaaaaacaaaggagaagatggtttgcccgat
actttgtttccgccaactgaggaagaggccaaggatttcaacttgcaaaattgtgtaaga
gtgtatccacatttgcaaaatactggtggcttctttatcaccgtttttgaaaaattggat
gatgagccggtaaagagaaaagcagtcgatgctggttccgaatctttggaggcaaaaaag
ccaaaacttgctgatgcatcagagtccaatgaaacatctacgcctcaaccagttgtggtt
ccaaatgataccgttgttgctgacaaaccagttgagatgaagaaaacaaagcttcccaga
gatgcaaacgaagagccatttatctttttggaccctgagaaccccaaaattgctgagtgt
tatggcttttatggattctctgattctttccgcaaggattgtactttggtgagaaacctg
acgggtgagccagtgaggactgtttactatgcttctcctccaattaaagagcttctcact
attaaggagcaaaagctcaaattggtacatggaggtatcaaattatttgttgctcaaaga
agtgaatccacatcgtgtccatggagaatacaaaccgaggctctacataccattgagcat
tttgttggtaaagaaagaagactcaagtgtaaccttgagttgctcaggtatcttttcacg
aatgggttcccaaaaattgacgaaattagagaacagaacattgatgcagagtttttggaa
ggtttggaatcgaaagaagaaggttgtttgtttttagaagttgagcgtggtaacaacttg
gaggcattgtttttacctatctggaagggcagaagcaacgttaatttaatggttagtaag
aaggacacgcatgaactcctttctcgagtgtttgacattgatacttctgccaaggacgaa
gttaaagaagtaatccacttgaagaaaattaccgaagaaagacaagaaaagaaagatgag
gaagctgaagatacttcaaaagactag
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