Lodderomyces elongisporus: PVL30_002703
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Entry
PVL30_002703 CDS
T01116
Symbol
arc1
Name
(RefSeq) ARP2/3 actin-organizing complex subunit Sop2
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
lel
Lodderomyces elongisporus
Pathway
lel04138
Autophagy - yeast
lel04144
Endocytosis
lel05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PVL30_002703 (arc1)
04138 Autophagy - yeast
PVL30_002703 (arc1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
PVL30_002703 (arc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lel04131
]
PVL30_002703 (arc1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lel04812
]
PVL30_002703 (arc1)
Membrane trafficking [BR:
lel04131
]
Others
Actin-binding proteins
Arp2/3 complex
PVL30_002703 (arc1)
Cytoskeleton proteins [BR:
lel04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
PVL30_002703 (arc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Gmad1
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Ge1_WD40
NBCH_WD40
WDR90_beta-prop_4th
Sporozoite_P67
CENP-I
Motif
Other DBs
NCBI-GeneID:
5232750
NCBI-ProteinID:
XP_001525282
UniProt:
A5E0S3
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All DBs
Position
3:complement(1054985..1056157)
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AA seq
390 aa
AA seq
DB search
MSKVPAIYQLGHLPIKDHVFSPDRTILAVTKENEVEVYKINPSHLDSKPQLIANLRDHDK
TVTSVDISPDGSRILTCSQDRNALVWEYRDGEFKPTLVLLRINRAATVCRWSPDGQKFAV
GSSDRIIAVCYYEEENDWWISKHLKKPIKSTITTLDWHPNGVLLACGSTDGHVRVFSGYI
KGIDAKPEPSVWGSKLPFQTLCGDFTNETLAWIHGVKFSPDGNALAWVSHDSSIGVVYPD
GEGLPPRSILNVKTDYLPFKSIVWTSDDSVVVGGFNCNLVVFKGNESSWQEAYKIEEQKD
LTKDTPRNRDGDNDDDEDEDSPEISSHQALNMFKQMDLKGRVNKPGAGSSGKSAKALSTI
HQNTIASIRNFAPGKVSTSGIDGKVVIFNV
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtaccagctatctatcaattgggtcatttacccatcaaagaccacgttttt
tccccagatagaacaattctcgcggtgaccaaggagaatgaagttgaggtttacaagatc
aatccatcccaccttgactctaagcctcaacttattgccaatcttagagaccacgacaag
acggtgacttcagttgacatttcaccagacgggtctcgtattcttacttgttctcaagat
agaaatgctttagtttgggaatatcgtgatggcgaatttaaaccaacacttgttcttctc
cgtatcaatagagctgccacagtgtgtcgctggtcaccggacggacagaaatttgctgtt
ggatccagtgatagaattattgctgtttgctactacgaggaagaaaatgactggtggatc
tcaaagcatttgaaaaagccaatcaagtcgactatcaccactttggattggcatccaaat
ggtgtgttattagcctgcggctcaaccgatggtcatgtgcgtgtgtttagtggatacatc
aagggaattgatgctaagcccgagccaagtgtgtggggttcgaaactaccatttcagact
ctttgtggcgactttaccaatgagacgttggcatggattcacggagtgaaattcagtcct
gatggaaatgctttggcgtgggtgtcacacgattcatcaattggtgttgtttatcccgat
ggtgaagggttgcctcctagatccattttgaatgtcaagacggattatttaccgttcaag
tccatagtgtggacctccgacgactctgttgttgtgggtggtttcaattgcaacttggtt
gtctttaaggggaatgagtctagttggcaagaggcttacaagattgaagagcaaaaggac
ttgacaaaagatacaccaagaaaccgcgatggcgataatgatgatgatgaagacgaagat
agtcctgagatatcctcgcaccaagcattaaacatgtttaagcaaatggatttgaaagga
agggtcaacaagccgggtgcaggaagcagcggtaaatccgctaaagcattgagcacaata
catcaaaatacaatagccagtataagaaatttcgctcctggaaaagtctccacctcaggt
atcgatggtaaagtggtgattttcaatgtttga
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