Lodderomyces elongisporus: PVL30_002777
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Entry
PVL30_002777 CDS
T01116
Symbol
RET1
Name
(RefSeq) DNA-directed RNA polymerase III core subunit ret1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PVL30_002777 (RET1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lel03021
]
PVL30_002777 (RET1)
Enzymes [BR:
lel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PVL30_002777 (RET1)
Transcription machinery [BR:
lel03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
PVL30_002777 (RET1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
5232820
NCBI-ProteinID:
XP_001525350
UniProt:
A5E0Z1
LinkDB
All DBs
Position
3:complement(1214329..1217802)
Genome browser
AA seq
1157 aa
AA seq
DB search
MPPRKKGRHSSTADAAFNDLLKPTYRGKRLEDEINTAEDKWNLLPAFLKIKGLVKQHLDS
FNYFVDTDLKKILKANSLVLSDVDPDFYVKYLDIRVGHKSTSAPGTKEVILPPHECRLRD
LTYSAPIYVDVEYTRGRKIIRHNDLEIGRMPVMLRSNKCMLDGLDERQMAQVDECPLDPG
GYFVVNGTEKVILVQEQLSKNRIIVEADDKKGIVQASVTSSTHERKSKTYVITKNGKIYL
KHNSIGEDVPIVIVLKAAGITSDLEILQLVCGSNPHYQDLFVVNFEEAARLEVFTQQQAL
LYLGKRVKTIRRAGAPKLSQLQEGIEAIATTIVAHLTVSNLQFKEKAFYMAMMARRVVMA
MHNPKMVDDRDYVGNKRLELAGQLMSLLFEDLFKKFNSDFKANIDKILKKPSRTTEFDAL
LSINIHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEK
SRKVSGPRALQPSQFGMLCTADTPEGEACGLVKNLALMTHITTDDEELPIKKLCIALGCE
SILGLDSSTLHVDGNFGVFLNGTLIGATRFPVKFVNDFRHLRRAGKVSAFISIYTNTHHQ
AVHLATDGGRICRPLIIVEKNKSKVQSEHLKKLLRGEWQFDDFLREGLVEYLDVNEENDS
LIALYEKDIGSNANATVTHLEIEPFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAI
AYNQFKRIDTLLYFMVYPQQPMVKTKTIELINYDKLPAGQNATVAVMSYSGYDIEDALVL
NKSSLDRGFGRCQVVRKNTVQLKKYPNHTKDILSGMRVDENNEPIFPHQALGPDGLGEVG
SRIENGQVFANKFVPTNSGESTFAGGMQQQPQAESHREAAQYYKGPEPSYVDQVMMSVSD
NDQALVKVLLRQTRRPELGDKFSSRHGQKGVCGIIVQHEDLPFNDDGISPDIIMNPHGFP
SRMTVGKMIELISGKAGVLNGSLEYGTCFGGSKLEDMSKILVSKGFSYSGKDMLYSGITG
ECLQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCV
IAYGASQLLLERLMISSDAFEVDVCNKCGLMGYNSWCTTCKGSENIIKMTIPYAAKLLFQ
ELLSMNIAPRLRLGDVF
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctagaaaaaagggaagacattcttccactgcggatgctgcattcaatgatctt
ttaaaaccaacatatagaggtaaaagattagaggatgaaatcaatacggcggaggacaaa
tggaatctactaccggcattcctcaagatcaagggacttgtgaaacaacacttggactca
ttcaactattttgttgacacagacttgaagaagattttgaaagcaaattctttagtgcta
tccgatgtggatcctgatttttatgtcaagtatctcgatatacgagttggacacaagtcg
acctcagcgccaggaacaaaagaagtcattttgccacctcacgagtgtagacttcgagat
cttacctatagtgcaccaatatatgttgatgtggagtacacaagaggacgcaagattatt
agacacaatgatctcgagattggaagaatgcctgttatgttgcgttccaacaagtgtatg
ttggatggactcgatgaaaggcaaatggcgcaagtagacgaatgtccattggatcctggt
ggatactttgtagttaatggtacagaaaaagttattttggtccaagaacaattgtcgaaa
aacagaattatcgttgaggcagatgacaagaaggggattgttcaagcttcggtaacgtca
tcaacgcatgagagaaaatcaaagacctacgtcatcaccaagaatggcaagatttacttg
aagcacaactctattggtgaagatgtgcctattgttattgtattaaaagccgcaggtatc
acttctgatttggagatattacaattggtttgtgggtcaaatcctcattaccaagacttg
tttgttgtcaattttgaagaagcagcaagattagaggttttcacacagcaacaggctctt
ttgtatttggggaaaagggtcaagaccataagaagagctggtgctcccaaattgtcgcaa
ttgcaggaaggtatagaggcaatagctacaaccattgtggcgcatttaactgtgagcaac
ttgcaatttaaggaaaaagcattctacatggctatgatggctagaagagtagttatggcg
atgcataatccgaaaatggttgatgatagggattatgttggtaataagagattggaactt
gcaggacaattaatgtctttgctttttgaagatttgttcaaaaaatttaactcagatttc
aaagccaacatagacaagatattgaaaaaaccaagtcgaacaacagagtttgacgctctt
ctttcgataaatattcattcaaataatataaccatgggtctaaatagggccatctccact
ggtaattggtccttaaaacggttcaagatggagagggctggtgtgacccatgttttgtca
agattgtcatacatctctgccttgggtatgatgacacgtatctcgtctcagtttgaaaaa
tcaagaaaagtgtcgggtccaagagcattacaaccatcgcagtttggtatgctttgtact
gctgatacaccagaaggtgaagcttgtggtcttgttaaaaatttggcattgatgacccac
atcacaacggatgatgaagagcttccaataaagaagctttgcatagctcttggatgtgag
tccatactaggtcttgactcatcaactttgcatgttgacggaaactttggagtgtttttg
aacggtactttgattggtgccaccaggtttccagtcaaatttgtcaatgatttcagacac
ttgagacgtgctggtaaagtctcggctttcatctctatatatacaaacacgcatcatcaa
gcagtccatttggcaactgatggaggaagaatttgtcgtcctttaattattgtggaaaag
aacaagtccaaagtacaatcagaacatttgaaaaaattactcagaggtgagtggcaattt
gatgatttcttaagagaaggtttagtggagtatttggatgtcaatgaggaaaatgactcg
ttgattgctctttacgaaaaggatattggctctaatgccaatgccacagttacccatctt
gaaattgagccatttaccgtccttggtgccgttgctggattaattccatatccacatcat
aaccaatcacctagaaatacatatcaatgtgcgatgggtaagcaagctattggtgctata
gcttataatcaatttaagagaattgacactttgctttactttatggtttatcctcaacaa
ccaatggtaaagacaaagaccattgaattgattaactacgataaactaccggctggtcaa
aatgccacggttgcagttatgtcctattctgggtacgatattgaggatgccttggtgttg
aataaatcttctttggatagaggttttggaagatgtcaagttgttcgtaagaacactgtt
cagttgaagaaatatccaaatcatacaaaggacattctttccggtatgagggttgatgaa
aataacgagccgattttcccgcatcaagctttggggcctgatggacttggtgaagttgga
agcagaattgaaaatgggcaagtgtttgcaaacaagtttgtgcctacaaactctggagag
tctacttttgcaggaggcatgcaacaacaacctcaagccgagagtcatagagaagcagca
caatactacaaaggacctgagccatcgtatgtggaccaagtgatgatgtctgttagtgac
aatgatcaagcattggttaaggtgcttttgagacaaacgagaagaccagagttgggagat
aaattttcctcaagacacggtcaaaagggtgtttgtggtatcattgtgcagcatgaggac
ttgccgtttaacgatgatggtatatctcctgatattattatgaacccacatggtttccca
tcgcgtatgacggttggtaaaatgattgaattgatttcaggtaaagctggtgtccttaat
gggtccttggagtatggtacttgttttggaggttcgaaattggaagatatgtcgaaaatt
ttggtgagcaaagggttctcctattctggtaaggatatgttgtactctggaataactggt
gagtgtcttcaagcttatattttctttggcccaatctattatcaaaaattgaaacacatg
gtgttggacaagatgcacgcaagagcaagaggtccaagggccgttttaacaagacaaccc
accgagggtagatcaagagatggtggtttgagattgggagagatggagagagactgtgtt
atagcatatggtgcctcgcaattacttttggaaagattaatgatttcctcggatgccttt
gaagttgatgtttgtaacaagtgtggattaatgggttacaactcttggtgtaccacttgt
aaaggaagtgagaatattataaagatgaccataccctacgctgcaaagttattgttccaa
gaattgctttcaatgaacattgcgccaagattgagactaggcgatgtcttttag
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