Lodderomyces elongisporus: PVL30_002806
Help
Entry
PVL30_002806 CDS
T01116
Symbol
FEN1
Name
(RefSeq) Elongation of fatty acids protein 2
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
lel
Lodderomyces elongisporus
Pathway
lel03030
DNA replication
lel03410
Base excision repair
lel03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PVL30_002806 (FEN1)
03410 Base excision repair
PVL30_002806 (FEN1)
03450 Non-homologous end-joining
PVL30_002806 (FEN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lel03032
]
PVL30_002806 (FEN1)
03400 DNA repair and recombination proteins [BR:
lel03400
]
PVL30_002806 (FEN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lel04147
]
PVL30_002806 (FEN1)
DNA replication proteins [BR:
lel03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
PVL30_002806 (FEN1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
PVL30_002806 (FEN1)
DNA repair and recombination proteins [BR:
lel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
PVL30_002806 (FEN1)
Exosome [BR:
lel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PVL30_002806 (FEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_2
Motif
Other DBs
NCBI-GeneID:
5232249
NCBI-ProteinID:
XP_001525380
UniProt:
A5E121
LinkDB
All DBs
Position
3:complement(1295215..1296369)
Genome browser
AA seq
384 aa
AA seq
DB search
MGVKGLNQLIKEHSPHAYKEFELKNLFGRKVAIDASMCLYQFLIAVRQSDGQQLTNDEGE
TTSHLSGIFYRTIRMVENNIKPVYVFDGKPPVLKGGELEKRLLKREEAQKQIDNLKDDAS
VSDMTKYQKRLVRVSRDQNDEAKKLLELMGIPYVNAPCEAEAQCAELARGGKVFAAASED
MDTLCYEPPQLLRHLTFAEARKMPIDQITYKEAIQGLDMTKEQFIDLCILLGCDYCETIK
GVGPVTAYKLIKEHGSLDNIVKYLQENPDKTKYKVPENWPYNEARQLFMKPEVLPASEVE
LKWKEPDLDGLIEYMVKNKGFSEDRIRSGAEKLKKGLKAGIQGRLDGFFTVVPKNSNTSP
SGKDDKKRKTNDKKGAAAKKTKRR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcaagggtctcaaccagctcatcaaagagcactctccacatgcatacaaagaa
ttcgaactcaagaacctctttggtcgcaaagtcgccattgatgcttccatgtgtctttat
caattcttaattgccgtgcgtcaatcagatggccaacaattgaccaatgacgagggtgaa
actacatcccatttgtctggtattttttacagaactattcgaatggttgagaataacatc
aagccagtgtatgtttttgatggtaagccaccagtcttgaaaggtggtgagttggagaaa
cgattgctcaagagagaagaagctcaaaaacaaattgataatctaaaagacgacgcctca
gttagtgatatgacaaagtaccaaaagagattggttagagtaagtcgcgatcaaaacgac
gaggctaaaaagttactagagctcatgggaatcccctatgttaacgcaccatgcgaagct
gaagcacaatgcgcagagttggcacgcggtggtaaagtgtttgctgctgcaagtgaagat
atggacacgctttgttacgaaccaccacagttactaagacatttgacatttgccgaggca
agaaaaatgcccatcgaccaaatcacatataaagaagccatacaaggcttggatatgacc
aaagaacaatttattgacttgtgtattttattaggatgcgactactgtgagacaattaaa
ggtgttggtcctgttaccgcctacaagttgatcaaagaacacggctccttggacaatatt
gtaaagtatttgcaagaaaaccccgacaaaaccaaatataaagtaccagaaaattggcca
tacaacgaagctagacaattattcatgaaaccagaagtgctacctgcactggaagtagag
ttgaagtggaaagaaccagatttagatggattgattgaatatatggtaaagaataaaggt
tttagtgaggataggataagaagcggtgctgagaaattgaaaaaaggattgaaagcaggg
attcaaggaagattagatgggtttttcacagttgtgccaaaaaacagcaacacatcacca
ctggggaaagatgacaaaaaaagaaaaacaaacgacaagaaaggcgctgctgcgaaaaag
acaaaaaggaggtaa
DBGET
integrated database retrieval system
