Lodderomyces elongisporus: PVL30_002907
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Entry
PVL30_002907 CDS
T01116
Symbol
NUP49
Name
(RefSeq) Nucleoporin nup49/NSP49 (Nuclear pore protein nup49/NSP49)
KO
K14307
nucleoporin p58/p45
Organism
lel
Lodderomyces elongisporus
Pathway
lel03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PVL30_002907 (NUP49)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lel03019
]
PVL30_002907 (NUP49)
Messenger RNA biogenesis [BR:
lel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PVL30_002907 (NUP49)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
BLOC1_2
ARM_TBCD
DUF7809
Motif
Other DBs
NCBI-GeneID:
5232749
NCBI-ProteinID:
XP_001525483
UniProt:
A5E1C4
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Position
3:1575020..1576321
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AA seq
433 aa
AA seq
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MFGQASKPSSSFGGFGSSNTNTNIGTASGGNGGGGGGLFGAKPATSTGGLFGQSNTQQGN
TSGGLFGSNPGATNIGTGGGLFGQNQSGTTGTSGGLFGGQQNQQNQPSTTAGGLFGQSNQ
QSTGQGTGTSTGLFGANKPASSGLFGNTGGTSGGGLFGNTQTGKPSSGLFGGNSSNTTQS
SGGLFGNNTSNQSNSGGLFGSSNTQSSGGGLFGNKPATSGGGLFGSQQQLQQQPQQQQQQ
QQQQVQLTAMTRVGDLPPEIKNELQQLDTYINTQHLIATTLNSDMSKHNELVETIPKDIN
YLQNKLLSTKQALKFDTSQLSALKTMNNEVTEDINNIMQLIIQLSTPGTKLSSSYQLNEF
FIKKIKNYHEMVRLYEETIAELEVVLNGLERNCNEGFGNLASIIQVIKTQYALFMELCET
MAQLHNEVKRLQK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtcaagcatcaaagccaagctcttcatttggaggattcggctcttcaaacaca
aatacaaacatcggtactgcaagtggtggtaatggtggtggtggtggtggtttgtttggc
gccaaaccagcaacatcaaccggaggtctctttggacaatccaatacacaacaaggtaat
acaagtggtggactttttggaagtaatcctggcgctactaatattggtacaggtggtggg
ttgtttggtcagaatcaaagtgggacaacaggaacatccggaggactttttggtggtcaa
cagaatcagcaaaaccagccatcgactaccgctggcgggctttttggccaatctaatcaa
caactgacaggacaaggcactggtactagtacggggctctttggagctaacaaacctgca
tcgagtggactttttggaaatactggaggtacaagtggtggaggactatttggcaatact
caaactggtaaaccctcaagtgggctatttggtggaaacagttctaatacaacacagtcc
agtggtggcctctttggcaacaacacttctaatcagtctaatagtggaggtttatttggt
tcatccaatacgcaatctagcggaggaggcttatttggcaataaacctgctacttctggc
ggaggactttttggtctgcaacaacaattgcaacagcaacctcagcaacaacaacaacaa
caacaacaacaggtccagctcactgctatgactagagttggtgacttgccacccgaaatc
aagaacgaattgcaacagctcgacacatatatcaatacacagcatttgattgctacaaca
ttgaattcggatatgtctaaacataatgaattggtagagaccatacccaaggatattaac
taccttcagaacaaattgctttcaacaaaacaagctttgaagttcgacacaagtcagcta
ctggctttgaaaaccatgaacaatgaagtcaccgaggatatcaataacataatgcaacta
attatccaattaagcactccgggtacaaagctatctagctcataccaattgaatgagttt
tttataaaaaaaattaaaaactatcatgaaatggttcgattgtacgaagagacaattgca
gaattagaagtagtgctcaatggacttgaacgaaattgcaatgaaggttttggtaatttg
gcaagcattattcaagtgatcaagacacaatatgccttgttcatggagctttgtgaaaca
atggcccaattacacaacgaggtgaagagattgcaaaagtag
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